Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC008753.1-201ENST00000423096 284 ntBASIC7.48□□□□□ -1.21
NEK3P51956 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.48□□□□□ -1.21
NEK3P51956 AF274573.1-201ENST00000430535 494 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.48□□□□□ -1.21
NEK3P51956 AC005040.1-201ENST00000437783 482 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.48□□□□□ -1.21
NEK3P51956 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
NEK3P51956 GAPDHP16-201ENST00000448152 962 ntBASIC7.48□□□□□ -1.21
NEK3P51956 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.48□□□□□ -1.21
NEK3P51956 AC093827.1-201ENST00000480094 861 ntBASIC7.48□□□□□ -1.21
NEK3P51956 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.48□□□□□ -1.21
NEK3P51956 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
NEK3P51956 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
NEK3P51956 IGKV2-29-201ENST00000521304 372 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC7.48□□□□□ -1.21
NEK3P51956 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 OR6M3P-201ENST00000531567 700 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AC103855.4-201ENST00000533158 265 ntBASIC7.48□□□□□ -1.21
NEK3P51956 ATP5J2P4-201ENST00000538774 267 ntBASIC7.48□□□□□ -1.21
NEK3P51956 EGLN3P1-201ENST00000541727 720 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
NEK3P51956 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.48□□□□□ -1.21
NEK3P51956 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.48□□□□□ -1.21
NEK3P51956 RN7SL689P-201ENST00000577215 297 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AC024614.1-201ENST00000577546 307 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.48□□□□□ -1.21
NEK3P51956 FXYD6P1-201ENST00000604857 285 ntBASIC7.48□□□□□ -1.21
NEK3P51956 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC7.48□□□□□ -1.21
NEK3P51956 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.48□□□□□ -1.21
NEK3P51956 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.48□□□□□ -1.21
NEK3P51956 AL118508.4-201ENST00000624142 1176 ntBASIC7.48□□□□□ -1.21
NEK3P51956 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 QRSL1P3-201ENST00000552666 1316 ntBASIC7.48□□□□□ -1.21
NEK3P51956 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.48□□□□□ -1.21
NEK3P51956 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
NEK3P51956 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NEK3P51956 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
NEK3P51956 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.47□□□□□ -1.21
NEK3P51956 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.47□□□□□ -1.21
NEK3P51956 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 AL031651.1-201ENST00000615357 1438 ntBASIC7.47□□□□□ -1.21
NEK3P51956 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 RN7SKP174-201ENST00000363803 330 ntBASIC7.47□□□□□ -1.21
NEK3P51956 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.47□□□□□ -1.21
NEK3P51956 TYMSP1-201ENST00000407851 869 ntBASIC7.47□□□□□ -1.21
NEK3P51956 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.47□□□□□ -1.21
NEK3P51956 AC096644.3-201ENST00000416788 338 ntBASIC7.47□□□□□ -1.21
NEK3P51956 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC7.47□□□□□ -1.21
NEK3P51956 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 AL390840.1-201ENST00000420303 988 ntBASIC7.47□□□□□ -1.21
NEK3P51956 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.47□□□□□ -1.21
NEK3P51956 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.47□□□□□ -1.21
NEK3P51956 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NEK3P51956 Z85994.2-201ENST00000434327 452 ntBASIC7.47□□□□□ -1.21
NEK3P51956 AL392003.1-201ENST00000434394 243 ntBASIC7.47□□□□□ -1.21
NEK3P51956 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.47□□□□□ -1.21
NEK3P51956 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.47□□□□□ -1.21
NEK3P51956 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.47□□□□□ -1.21
NEK3P51956 RBMY3AP-201ENST00000449381 1145 ntBASIC7.47□□□□□ -1.21
NEK3P51956 AL928654.1-201ENST00000476081 354 ntBASIC7.47□□□□□ -1.21
NEK3P51956 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.47□□□□□ -1.21
NEK3P51956 RN7SL705P-201ENST00000481678 294 ntBASIC7.47□□□□□ -1.21
NEK3P51956 EIF4E2P2-201ENST00000492033 736 ntBASIC7.47□□□□□ -1.21
NEK3P51956 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC7.47□□□□□ -1.21
NEK3P51956 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.47□□□□□ -1.21
NEK3P51956 AC122713.1-201ENST00000518368 1015 ntBASIC7.47□□□□□ -1.21
NEK3P51956 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.47□□□□□ -1.21
NEK3P51956 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.47□□□□□ -1.21
NEK3P51956 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.47□□□□□ -1.21
NEK3P51956 AC009268.1-201ENST00000561352 1203 ntBASIC7.47□□□□□ -1.21
NEK3P51956 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.47□□□□□ -1.21
NEK3P51956 AC090241.1-201ENST00000587732 621 ntBASIC7.47□□□□□ -1.21
NEK3P51956 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.47□□□□□ -1.21
NEK3P51956 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC7.47□□□□□ -1.21
NEK3P51956 AC023206.1-201ENST00000605824 298 ntBASIC7.47□□□□□ -1.21
NEK3P51956 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.47□□□□□ -1.21
NEK3P51956 AL356752.1-201ENST00000615844 593 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms