Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC004241.3-201ENST00000611728 517 ntBASIC8.82□□□□□ -1
ERCC3P19447 AL121985.3-201ENST00000620690 523 ntBASIC8.82□□□□□ -1
ERCC3P19447 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
ERCC3P19447 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
ERCC3P19447 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.82□□□□□ -1
ERCC3P19447 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 TNFSF15-201ENST00000374044 2789 ntBASIC8.82□□□□□ -1
ERCC3P19447 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 TMEM75-201ENST00000624314 2165 ntBASIC8.82□□□□□ -1
ERCC3P19447 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.82□□□□□ -1
ERCC3P19447 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 AC007923.2-201ENST00000584218 1591 ntBASIC8.82□□□□□ -1
ERCC3P19447 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.82□□□□□ -1
ERCC3P19447 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
ERCC3P19447 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.82□□□□□ -1
ERCC3P19447 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 CDY11P-201ENST00000447168 1651 ntBASIC8.81□□□□□ -1
ERCC3P19447 CCNT2P1-201ENST00000423082 1315 ntBASIC8.81□□□□□ -1
ERCC3P19447 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC8.81□□□□□ -1
ERCC3P19447 KYNUP1-201ENST00000466683 1406 ntBASIC8.81□□□□□ -1
ERCC3P19447 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
ERCC3P19447 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC8.81□□□□□ -1
ERCC3P19447 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
ERCC3P19447 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC8.81□□□□□ -1
ERCC3P19447 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
ERCC3P19447 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8.81□□□□□ -1
ERCC3P19447 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC8.81□□□□□ -1
ERCC3P19447 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8.81□□□□□ -1
ERCC3P19447 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.81□□□□□ -1
ERCC3P19447 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC8.81□□□□□ -1
ERCC3P19447 AL139327.1-201ENST00000382988 348 ntBASIC8.81□□□□□ -1
ERCC3P19447 ZNF37CP-201ENST00000406795 241 ntBASIC8.81□□□□□ -1
ERCC3P19447 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 AC231533.2-201ENST00000419045 978 ntBASIC8.81□□□□□ -1
ERCC3P19447 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC8.81□□□□□ -1
ERCC3P19447 NQO1-204ENST00000439109 924 ntTSL 2 BASIC8.81□□□□□ -1
ERCC3P19447 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC8.81□□□□□ -1
ERCC3P19447 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 CDC42P2-201ENST00000448566 569 ntBASIC8.81□□□□□ -1
ERCC3P19447 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC8.81□□□□□ -1
ERCC3P19447 snoU109.3-201ENST00000459477 145 ntBASIC8.81□□□□□ -1
ERCC3P19447 TUBBP11-201ENST00000472255 252 ntBASIC8.81□□□□□ -1
ERCC3P19447 RN7SL423P-201ENST00000486202 304 ntBASIC8.81□□□□□ -1
ERCC3P19447 RN7SL205P-201ENST00000490174 284 ntBASIC8.81□□□□□ -1
ERCC3P19447 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.81□□□□□ -1
ERCC3P19447 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 AC108471.2-205ENST00000529314 628 ntTSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -1
ERCC3P19447 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 AC005262.1-201ENST00000588562 362 ntBASIC8.81□□□□□ -1
ERCC3P19447 AL390058.1-201ENST00000603834 629 ntBASIC8.81□□□□□ -1
ERCC3P19447 AC108451.2-201ENST00000603875 538 ntBASIC8.81□□□□□ -1
ERCC3P19447 QTRT1P1-201ENST00000604344 1078 ntBASIC8.81□□□□□ -1
ERCC3P19447 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 AP005229.2-201ENST00000609980 697 ntBASIC8.81□□□□□ -1
ERCC3P19447 AC140725.3-201ENST00000616193 880 ntBASIC8.81□□□□□ -1
ERCC3P19447 pRNA.9-201ENST00000618609 89 ntBASIC8.81□□□□□ -1
ERCC3P19447 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC8.81□□□□□ -1
ERCC3P19447 AL109659.3-201ENST00000624985 950 ntBASIC8.81□□□□□ -1
ERCC3P19447 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.81□□□□□ -1
ERCC3P19447 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.81□□□□□ -1
ERCC3P19447 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.81□□□□□ -1
ERCC3P19447 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.81□□□□□ -1
ERCC3P19447 AC036108.4-201ENST00000611654 2516 ntBASIC8.81□□□□□ -1
ERCC3P19447 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ERCC3P19447 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 AL008638.3-201ENST00000623027 5182 ntBASIC8.8□□□□□ -1
ERCC3P19447 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.8□□□□□ -1
ERCC3P19447 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.8□□□□□ -1
ERCC3P19447 RNA5SP35-201ENST00000391257 129 ntBASIC8.8□□□□□ -1
ERCC3P19447 Z86062.1-201ENST00000406773 777 ntBASIC8.8□□□□□ -1
ERCC3P19447 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 GAPDHP73-201ENST00000423411 1007 ntBASIC8.8□□□□□ -1
ERCC3P19447 SNX18P3-201ENST00000424993 835 ntBASIC8.8□□□□□ -1
ERCC3P19447 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC8.8□□□□□ -1
ERCC3P19447 RAB28P3-201ENST00000448325 597 ntBASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms