Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.54□□□□□ -1.2
RB1P06400 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.54□□□□□ -1.2
RB1P06400 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.54□□□□□ -1.2
RB1P06400 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
RB1P06400 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.54□□□□□ -1.2
RB1P06400 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.54□□□□□ -1.2
RB1P06400 SNORA7A-201ENST00000384765 139 ntBASIC7.54□□□□□ -1.2
RB1P06400 MIR323B-201ENST00000385269 82 ntBASIC7.54□□□□□ -1.2
RB1P06400 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RB1P06400 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.54□□□□□ -1.2
RB1P06400 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 AL121578.2-201ENST00000448797 447 ntBASIC7.54□□□□□ -1.2
RB1P06400 AC016724.1-201ENST00000453215 421 ntBASIC7.54□□□□□ -1.2
RB1P06400 AC117395.2-201ENST00000463122 1128 ntBASIC7.54□□□□□ -1.2
RB1P06400 RN7SL797P-201ENST00000486314 297 ntBASIC7.54□□□□□ -1.2
RB1P06400 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.54□□□□□ -1.2
RB1P06400 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.54□□□□□ -1.2
RB1P06400 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.54□□□□□ -1.2
RB1P06400 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.54□□□□□ -1.2
RB1P06400 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.54□□□□□ -1.2
RB1P06400 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.54□□□□□ -1.2
RB1P06400 Vault.2-201ENST00000516519 98 ntBASIC7.54□□□□□ -1.2
RB1P06400 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.54□□□□□ -1.2
RB1P06400 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.54□□□□□ -1.2
RB1P06400 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.54□□□□□ -1.2
RB1P06400 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.54□□□□□ -1.2
RB1P06400 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.54□□□□□ -1.2
RB1P06400 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.54□□□□□ -1.2
RB1P06400 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 DIMT1P1-201ENST00000603970 763 ntBASIC7.54□□□□□ -1.2
RB1P06400 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RB1P06400 AC073857.1-201ENST00000625082 1054 ntBASIC7.54□□□□□ -1.2
RB1P06400 EPS15P1-202ENST00000459691 2071 ntBASIC7.54□□□□□ -1.2
RB1P06400 AC010886.1-201ENST00000437380 2869 ntBASIC7.54□□□□□ -1.2
RB1P06400 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RB1P06400 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.54□□□□□ -1.2
RB1P06400 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
RB1P06400 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.54□□□□□ -1.2
RB1P06400 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.54□□□□□ -1.2
RB1P06400 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.54□□□□□ -1.2
RB1P06400 AC104581.5-201ENST00000624171 7141 ntBASIC7.54□□□□□ -1.2
RB1P06400 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.54□□□□□ -1.2
RB1P06400 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RB1P06400 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.53□□□□□ -1.2
RB1P06400 MAPK10-347ENST00000641762 2856 ntBASIC7.53□□□□□ -1.2
RB1P06400 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RB1P06400 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 CASC19-205ENST00000641013 1411 ntBASIC7.53□□□□□ -1.2
RB1P06400 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.53□□□□□ -1.2
RB1P06400 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.53□□□□□ -1.2
RB1P06400 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 MRPS17P1-201ENST00000596009 3130 ntBASIC7.53□□□□□ -1.2
RB1P06400 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.53□□□□□ -1.2
RB1P06400 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RB1P06400 SNORA64.3-201ENST00000365647 134 ntBASIC7.53□□□□□ -1.2
RB1P06400 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.53□□□□□ -1.2
RB1P06400 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.53□□□□□ -1.2
RB1P06400 AC018804.1-201ENST00000430381 618 ntBASIC7.53□□□□□ -1.2
RB1P06400 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.53□□□□□ -1.2
RB1P06400 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.53□□□□□ -1.2
RB1P06400 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC7.53□□□□□ -1.2
RB1P06400 PGAM4P2-201ENST00000512491 721 ntBASIC7.53□□□□□ -1.2
RB1P06400 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.53□□□□□ -1.2
RB1P06400 IGKV2D-38-201ENST00000518423 240 ntBASIC7.53□□□□□ -1.2
RB1P06400 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.53□□□□□ -1.2
RB1P06400 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.53□□□□□ -1.2
RB1P06400 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.53□□□□□ -1.2
RB1P06400 AC063962.1-201ENST00000608199 521 ntBASIC7.53□□□□□ -1.2
RB1P06400 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.53□□□□□ -1.2
RB1P06400 AL034408.1-201ENST00000637712 664 ntBASIC7.53□□□□□ -1.2
RB1P06400 CASC19-208ENST00000641056 1292 ntBASIC7.53□□□□□ -1.2
RB1P06400 CASC19-227ENST00000641411 1285 ntBASIC7.53□□□□□ -1.2
RB1P06400 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
RB1P06400 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RB1P06400 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.53□□□□□ -1.2
RB1P06400 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RB1P06400 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms