Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC093283.1-201ENST00000565306 1075 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 AC024267.2-201ENST00000582737 417 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 MIR6885-201ENST00000612241 66 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 AC130456.6-201ENST00000623745 765 ntBASIC8.27□□□□□ -1.09
HLA-DOAP06340 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.27□□□□□ -1.09
HLA-DOAP06340 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HLA-DOAP06340 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 AC067942.1-201ENST00000488045 1493 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 RN7SKP130-201ENST00000364924 301 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 SNORA70G-201ENST00000383923 142 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 HNRNPH1P2-201ENST00000396845 1210 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 AL034369.1-201ENST00000453808 477 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 AP003385.3-201ENST00000472498 287 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 RNA5SP318-201ENST00000516352 92 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 BMS1P16-201ENST00000556075 1147 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 AC211486.4-201ENST00000621495 113 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 AC011471.4-201ENST00000638271 216 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 AP002800.1-201ENST00000624982 2225 ntBASIC8.26□□□□□ -1.09
HLA-DOAP06340 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.26□□□□□ -1.09
HLA-DOAP06340 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-DOAP06340 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 AC129502.1-201ENST00000623261 1654 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 SNORD94-201ENST00000386037 137 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 FAM183DP-201ENST00000421987 399 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 E2F6P3-201ENST00000441743 743 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 KF459542.1-201ENST00000450908 553 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 AC114324.2-202ENST00000503812 134 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 MTATP6P25-201ENST00000574491 261 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 AC007255.2-201ENST00000604053 631 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 AC020658.4-201ENST00000613987 684 ntBASIC8.25□□□□□ -1.09
HLA-DOAP06340 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-DOAP06340 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-DOAP06340 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms