Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC100767.2-201ENST00000604840 693 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AC024940.4-201ENST00000605507 246 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC016722.3-201ENST00000568862 2463 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC026356.1-201ENST00000622688 1357 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 SPTLC1P2-201ENST00000407089 121 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 CBX1P2-201ENST00000453841 458 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 RNA5SP228-201ENST00000516232 133 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AP005212.3-201ENST00000619964 528 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC023490.2-201ENST00000359859 470 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 RN7SKP292-201ENST00000365522 317 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 RN7SKP139-201ENST00000410411 293 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AL360013.1-201ENST00000419031 858 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 UBBP5-201ENST00000446970 266 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC044860.2-201ENST00000561005 179 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC006967.3-201ENST00000594086 1093 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC073342.3-201ENST00000624211 193 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC6.49□□□□□ -1.37
CHD8Q9HCK8 AC023824.7-201ENST00000623041 5731 ntBASIC6.49□□□□□ -1.37
CHD8Q9HCK8 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 THAP12P3-201ENST00000456373 2266 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 RN7SKP108-201ENST00000411367 328 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 RBMY2KP-201ENST00000418221 992 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AC010240.2-201ENST00000445363 1205 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 BTF3P1-201ENST00000522014 495 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AC092718.4-201ENST00000566639 716 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AC117409.1-201ENST00000470499 1310 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AL158206.1-201ENST00000563205 1965 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms