Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SNORA2C-201ENST00000408564 137 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 RN7SKP232-201ENST00000410170 290 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 EIF4A1P13-201ENST00000415667 230 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 GTF3AP1-201ENST00000416942 1004 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 RPL5P28-201ENST00000418634 693 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 CR848007.2-201ENST00000424918 787 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC009303.1-201ENST00000426307 352 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 FAR1P1-201ENST00000427163 934 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 RNF11P2-201ENST00000427702 440 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC127024.1-201ENST00000490847 418 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC146944.3-201ENST00000509969 371 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC027801.3-201ENST00000515049 698 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AP003385.2-201ENST00000524910 973 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AP000619.1-201ENST00000540293 1000 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC004232.2-201ENST00000574245 821 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC034229.4-201ENST00000607861 441 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AC022743.1-201ENST00000624990 664 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 OR8A1-204ENST00000642111 1145 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 OR51C1P-202ENST00000641159 1444 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 GTF2IP1-202ENST00000614592 2047 ntBASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.81□□□□□ -1.32
AMBRA1Q9C0C7 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 RNA5SP483-201ENST00000363431 118 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 MIR199B-201ENST00000384849 110 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 RNA5SP18-201ENST00000390935 121 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 RNA5SP297-201ENST00000391029 113 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 KRT18P52-201ENST00000404956 846 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 CRIP1P3-201ENST00000416794 220 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 AL593856.1-201ENST00000419949 805 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 SNX18P3-201ENST00000424993 835 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 CYP4F32P-201ENST00000426492 504 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 AL590623.1-201ENST00000427864 105 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 HBBP1-201ENST00000433329 439 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 LIN28AP2-201ENST00000445283 458 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 MTND6P32-201ENST00000457611 483 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 RN7SL414P-201ENST00000469545 294 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 AC084878.1-201ENST00000480555 648 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 RN7SL338P-201ENST00000481467 293 ntBASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.8□□□□□ -1.32
AMBRA1Q9C0C7 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms