Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 MARK3P1-201ENST00000604796 643 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC025588.2-201ENST00000604851 466 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC245389.2-201ENST00000616023 576 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC006338.2-201ENST00000616864 791 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC242843.1-201ENST00000618702 573 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AP002782.1-201ENST00000623107 614 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AL359715.5-201ENST00000623431 443 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC093648.1-201ENST00000623546 606 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC005609.4-201ENST00000625071 447 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC019226.1-201ENST00000625666 515 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 OR2A20P-201ENST00000479887 2913 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 USP48-203ENST00000374732 3037 ntTSL 2 BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AC127024.8-201ENST00000623719 2094 ntBASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC6.51□□□□□ -1.37
SSBP3Q9BWW4 AL356473.1-201ENST00000406203 1408 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 U3.1-201ENST00000362500 215 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 RNA5SP378-201ENST00000363646 120 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 RNU6-906P-201ENST00000384700 70 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 HNRNPCP2-201ENST00000399515 881 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AL132875.1-201ENST00000403623 949 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 COX6A1P3-201ENST00000404167 293 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 TIMM9P2-201ENST00000419324 266 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 MTND1P10-201ENST00000426108 832 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 MTCYBP14-201ENST00000457471 715 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AP003385.2-201ENST00000524910 973 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 NPIPP1-203ENST00000547107 1071 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AL391156.1-201ENST00000554965 554 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 MIR4258-201ENST00000580920 91 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC103987.3-201ENST00000582071 292 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 NDUFA3P1-201ENST00000588007 252 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC129492.5-201ENST00000603489 315 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC067959.1-201ENST00000604334 379 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC004492.1-201ENST00000607036 742 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 MIR6829-201ENST00000620375 67 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC105105.5-201ENST00000622635 1294 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AC004232.3-201ENST00000622977 525 ntBASIC6.5□□□□□ -1.37
SSBP3Q9BWW4 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms