Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 RN7SKP130-201ENST00000364924 301 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 SNORA70G-201ENST00000383923 142 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 U3.52-201ENST00000384034 216 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AL121916.1-201ENST00000429405 308 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 APOBEC3AP1-201ENST00000511396 287 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AL133399.1-201ENST00000527476 298 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AC012175.1-201ENST00000603755 531 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 MBP-206ENST00000397863 4800 ntTSL 3 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 AC009237.3-203ENST00000442128 3551 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 RPL24P2-201ENST00000421023 475 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 AC019084.1-201ENST00000457337 432 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 SNRPCP6-201ENST00000528310 210 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 OR5BK1P-201ENST00000550421 823 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 MT1CP-201ENST00000567054 174 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 AC004232.1-201ENST00000571388 208 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 OR1E3-201ENST00000575608 948 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 MIR6849-201ENST00000618543 69 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 AL596244.1-201ENST00000567068 3779 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 AC022613.3-201ENST00000560740 1346 ntBASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP2Q96SN8 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 AC026310.1-201ENST00000396004 378 ntBASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 RNA5SP155-201ENST00000411154 129 ntBASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 CLNS1AP1-201ENST00000435954 682 ntBASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 RPL26P30-201ENST00000453533 435 ntBASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 AC244034.2-201ENST00000562504 509 ntBASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 AC012676.3-201ENST00000614983 479 ntBASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 AP000577.1-201ENST00000624366 878 ntBASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.06□□□□□ -1.12
CDK5RAP2Q96SN8 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms