Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMARCA4P51532 AC110602.1-201ENST00000437414 318 ntBASIC12.06□□□□□ -0.48
SMARCA4P51532 RBMY3AP-201ENST00000449381 1145 ntBASIC12.06□□□□□ -0.48
SMARCA4P51532 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC12.06□□□□□ -0.48
SMARCA4P51532 ULK4P1-202ENST00000565174 503 ntBASIC12.06□□□□□ -0.48
SMARCA4P51532 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMARCA4P51532 AP003115.1-201ENST00000569849 463 ntBASIC12.06□□□□□ -0.48
SMARCA4P51532 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC12.06□□□□□ -0.48
SMARCA4P51532 SNORA17.5-201ENST00000630429 132 ntBASIC12.06□□□□□ -0.48
SMARCA4P51532 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMARCA4P51532 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMARCA4P51532 ANKRD50-201ENST00000504087 8794 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SMARCA4P51532 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
SMARCA4P51532 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC12.06□□□□□ -0.48
SMARCA4P51532 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.06□□□□□ -0.48
SMARCA4P51532 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC12.06□□□□□ -0.48
SMARCA4P51532 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC12.06□□□□□ -0.48
SMARCA4P51532 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SMARCA4P51532 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SMARCA4P51532 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SMARCA4P51532 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC12.05□□□□□ -0.48
SMARCA4P51532 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.05□□□□□ -0.48
SMARCA4P51532 CASC19-246ENST00000641625 1606 ntBASIC12.05□□□□□ -0.48
SMARCA4P51532 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC12.05□□□□□ -0.48
SMARCA4P51532 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SMARCA4P51532 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
SMARCA4P51532 AL031985.1-201ENST00000392713 418 ntBASIC12.05□□□□□ -0.48
SMARCA4P51532 IGKV1OR2-3-201ENST00000411475 288 ntBASIC12.05□□□□□ -0.48
SMARCA4P51532 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC12.05□□□□□ -0.48
SMARCA4P51532 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC12.05□□□□□ -0.48
SMARCA4P51532 VPS25P1-201ENST00000455691 508 ntBASIC12.05□□□□□ -0.48
SMARCA4P51532 RPL7P51-201ENST00000490532 749 ntBASIC12.05□□□□□ -0.48
SMARCA4P51532 AC060775.1-201ENST00000518241 520 ntBASIC12.05□□□□□ -0.48
SMARCA4P51532 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC12.05□□□□□ -0.48
SMARCA4P51532 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC12.05□□□□□ -0.48
SMARCA4P51532 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC12.05□□□□□ -0.48
SMARCA4P51532 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SMARCA4P51532 AC073488.9-201ENST00000631601 754 ntBASIC12.05□□□□□ -0.48
SMARCA4P51532 SAMMSON-214ENST00000641395 1264 ntBASIC12.05□□□□□ -0.48
SMARCA4P51532 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SMARCA4P51532 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMARCA4P51532 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SMARCA4P51532 AC016769.2-201ENST00000414815 475 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC12.04□□□□□ -0.48
SMARCA4P51532 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMARCA4P51532 AC055733.3-201ENST00000505214 523 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 AC025458.1-201ENST00000506046 166 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 SCARNA21.2-201ENST00000516600 166 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC12.04□□□□□ -0.48
SMARCA4P51532 FXNP1-201ENST00000555153 337 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 AC023827.2-201ENST00000566880 1061 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC12.04□□□□□ -0.48
SMARCA4P51532 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC12.04□□□□□ -0.48
SMARCA4P51532 OSTC-205ENST00000613215 876 ntTSL 2 BASIC12.04□□□□□ -0.48
SMARCA4P51532 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SMARCA4P51532 AC011592.1-201ENST00000624647 3634 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC12.04□□□□□ -0.48
SMARCA4P51532 AC007938.1-201ENST00000562524 2902 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMARCA4P51532 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMARCA4P51532 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC12.04□□□□□ -0.48
SMARCA4P51532 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC12.04□□□□□ -0.48
SMARCA4P51532 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMARCA4P51532 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMARCA4P51532 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMARCA4P51532 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC12.04□□□□□ -0.48
SMARCA4P51532 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMARCA4P51532 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC12.04□□□□□ -0.48
SMARCA4P51532 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC12.04□□□□□ -0.48
SMARCA4P51532 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC12.04□□□□□ -0.48
SMARCA4P51532 Six3os1_4.1-201ENST00000615706 324 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 AP001264.1-201ENST00000620602 703 ntBASIC12.04□□□□□ -0.48
SMARCA4P51532 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMARCA4P51532 SPATA31D5P-201ENST00000376459 4784 ntBASIC12.03□□□□□ -0.48
SMARCA4P51532 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMARCA4P51532 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC12.03□□□□□ -0.48
SMARCA4P51532 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SMARCA4P51532 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMARCA4P51532 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMARCA4P51532 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
SMARCA4P51532 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMARCA4P51532 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMARCA4P51532 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMARCA4P51532 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SMARCA4P51532 AC004386.1-201ENST00000393214 761 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms