Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RCL1Q9Y2P8 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
RCL1Q9Y2P8 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.72□□□□□ -1.49
RCL1Q9Y2P8 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RCL1Q9Y2P8 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RCL1Q9Y2P8 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC5.72□□□□□ -1.49
RCL1Q9Y2P8 AL117378.2-201ENST00000622916 1337 ntBASIC5.72□□□□□ -1.49
RCL1Q9Y2P8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.72□□□□□ -1.49
RCL1Q9Y2P8 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RCL1Q9Y2P8 AL449283.1-201ENST00000602631 3403 ntBASIC5.71□□□□□ -1.49
RCL1Q9Y2P8 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.71□□□□□ -1.49
RCL1Q9Y2P8 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RCL1Q9Y2P8 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.49
RCL1Q9Y2P8 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.71□□□□□ -1.49
RCL1Q9Y2P8 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RCL1Q9Y2P8 C1D-202ENST00000407324 1379 ntTSL 3 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 TRIM51FP-201ENST00000526452 1353 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 RNU1-16P-201ENST00000365477 164 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC020983.1-201ENST00000417063 543 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 UQCRHP1-204ENST00000424609 274 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 BSNDP4-201ENST00000436076 388 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 PMS2P11-201ENST00000451831 574 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 RPL10P6-201ENST00000457497 318 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC096743.1-201ENST00000485172 319 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC097263.1-201ENST00000496795 606 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AP003041.2-201ENST00000525666 1180 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AP000619.1-201ENST00000540293 1000 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC092375.1-201ENST00000550410 637 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC009997.1-201ENST00000557862 129 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC012181.2-201ENST00000570210 699 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC015674.1-201ENST00000578482 267 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC093063.1-201ENST00000599317 363 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC068802.1-201ENST00000603420 732 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC008626.1-201ENST00000604384 255 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AL731533.2-201ENST00000607898 578 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC120057.5-201ENST00000623840 154 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 DOCK11P1-201ENST00000553480 5932 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 AC013488.1-201ENST00000526618 1838 ntBASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RCL1Q9Y2P8 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 API5P1-201ENST00000424316 1510 ntBASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 HMGB3P1-201ENST00000393368 573 ntBASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 VN1R66P-201ENST00000412929 916 ntBASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 RPSAP60-201ENST00000415403 880 ntBASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 GAPDHP73-201ENST00000423411 1007 ntBASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RCL1Q9Y2P8 OR7E62P-201ENST00000456741 477 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms