Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 MIR6829-201ENST00000620375 67 ntBASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.34□□□□□ -1.07
CUEDC1Q9NWM3 API5P1-201ENST00000424316 1510 ntBASIC8.34□□□□□ -1.08
CUEDC1Q9NWM3 KDELC1P1-201ENST00000512118 1509 ntBASIC8.34□□□□□ -1.08
CUEDC1Q9NWM3 AC110769.2-201ENST00000602760 1548 ntBASIC8.34□□□□□ -1.08
CUEDC1Q9NWM3 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AL078595.2-201ENST00000605309 1780 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 RN7SKP173-201ENST00000362821 315 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 MIR421-201ENST00000365696 85 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AL603865.2-201ENST00000401679 213 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 MIR548F1-201ENST00000408667 84 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 PGBD4P8-201ENST00000412993 562 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 HMGN1P34-201ENST00000413023 290 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 SEPT7P8-201ENST00000413308 775 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC009110.1-201ENST00000415422 558 ntTSL 4 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 NPM1P11-201ENST00000417106 855 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 VN1R42P-201ENST00000424651 344 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 ISCA1P1-201ENST00000426679 387 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 SGO1P2-201ENST00000429458 1589 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 PAICSP5-201ENST00000430406 1217 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 KCTD9P3-201ENST00000434597 1169 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 UBE2V1P8-201ENST00000437166 265 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 WBP1LP7-201ENST00000437905 363 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC000041.1-201ENST00000439655 175 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 MTND6P21-201ENST00000443620 482 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AL158829.1-201ENST00000449258 478 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC104843.1-201ENST00000451203 319 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC022336.1-201ENST00000475510 337 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 RACK1-211ENST00000504726 388 ntTSL 5 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC091965.2-201ENST00000512324 613 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 SCARNA15.1-201ENST00000516384 125 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 OR4A9P-201ENST00000526326 944 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 SLC5A4P1-201ENST00000532944 612 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 GSG1-206ENST00000537302 1028 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC084757.1-201ENST00000559987 490 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC093249.5-201ENST00000568120 430 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 RN7SL203P-201ENST00000579600 296 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 RN7SL118P-201ENST00000580570 302 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC044792.1-201ENST00000593294 196 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC022146.1-201ENST00000595307 847 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC079880.2-201ENST00000603790 1213 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AC018618.2-201ENST00000604770 446 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 OR51C1P-201ENST00000608504 942 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 U4.5-201ENST00000617137 123 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AL356321.1-201ENST00000621360 228 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AL137058.3-201ENST00000624531 3099 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 FRG1DP-201ENST00000635586 771 ntBASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms