Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC005040.1-201ENST00000437783 482 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 CR383656.6-201ENST00000550518 394 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC114477.1-201ENST00000605097 605 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC073857.1-201ENST00000625082 1054 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC122713.2-201ENST00000624942 3335 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 MCTP1-204ENST00000505078 2629 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AOX2P-204ENST00000487742 3284 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AL162632.3-201ENST00000566976 1625 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC003045.1-201ENST00000398779 713 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 PTMAP6-201ENST00000439110 327 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 RN7SKP35-201ENST00000517210 151 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC092266.1-201ENST00000610958 165 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 AC005393.1-201ENST00000617916 584 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.51□□□□□ -1.37
CHD8Q9HCK8 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CHD8Q9HCK8 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 PMS2P9-201ENST00000441237 515 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 PFN1P11-201ENST00000445829 389 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 OR51A1P-201ENST00000511110 946 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AC005632.2-201ENST00000564271 828 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AC069499.2-201ENST00000610665 382 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AC024884.1-201ENST00000620583 399 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 OR51E1-202ENST00000530215 2942 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 TMSB4XP4-201ENST00000323496 618 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 SUGT1P2-201ENST00000379452 992 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 RPL7P13-201ENST00000415103 741 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AP002453.1-201ENST00000492327 668 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.5□□□□□ -1.37
CHD8Q9HCK8 SETP3-201ENST00000581726 813 ntBASIC6.5□□□□□ -1.37
CHD8Q9HCK8 AC104785.1-201ENST00000603220 588 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms