Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL049541.2-201ENST00000626377 555 ntBASIC8.43□□□□□ -1.06
SNED1Q8TER0 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC8.43□□□□□ -1.06
SNED1Q8TER0 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SNED1Q8TER0 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 PRELID1P1-201ENST00000403549 660 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 NUCKS1P1-201ENST00000452067 703 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 AC021006.1-201ENST00000489849 553 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 SNORA74.1-201ENST00000516320 180 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 IGHV7-34-1-201ENST00000519200 350 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 AC091133.5-201ENST00000603088 301 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 AC007255.2-201ENST00000604053 631 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 CASC19-212ENST00000641153 1287 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 AL354702.2-202ENST00000641481 890 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 ENO1P4-201ENST00000416471 1785 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 AC129502.1-201ENST00000623261 1654 ntBASIC8.42□□□□□ -1.06
SNED1Q8TER0 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNED1Q8TER0 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
SNED1Q8TER0 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 YWHAZP6-201ENST00000399764 738 ntBASIC8.41□□□□□ -1.06
SNED1Q8TER0 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 NDUFA5P5-201ENST00000468361 342 ntBASIC8.41□□□□□ -1.06
SNED1Q8TER0 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 AC112484.3-201ENST00000505910 329 ntBASIC8.41□□□□□ -1.06
SNED1Q8TER0 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 SNORA16A-202ENST00000628458 135 ntBASIC8.41□□□□□ -1.06
SNED1Q8TER0 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 OR2AH1P-202ENST00000641232 2744 ntBASIC8.41□□□□□ -1.06
SNED1Q8TER0 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
SNED1Q8TER0 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNED1Q8TER0 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNED1Q8TER0 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNED1Q8TER0 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SNED1Q8TER0 AC090771.1-201ENST00000585803 1618 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms