Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 HMGN1P17-201ENST00000513734 295 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 IGKV3D-31-201ENST00000519131 281 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 ATP5L-202ENST00000524422 720 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC021006.2-201ENST00000526978 859 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LINC02359-201ENST00000545642 643 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC087883.1-201ENST00000551882 391 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 OR7E159P-201ENST00000553761 298 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 ELOCP28-201ENST00000590044 317 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AL163642.2-201ENST00000604722 1019 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AL592504.1-201ENST00000605319 439 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AL109618.2-201ENST00000605527 211 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC002059.1-201ENST00000608014 477 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 SNCA-212ENST00000611107 297 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC124319.3-201ENST00000616832 526 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AL136981.2-201ENST00000617319 734 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC090099.1-204ENST00000623626 849 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 MIR1322-201ENST00000638013 71 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 PARP1P1-201ENST00000413631 3026 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC004023.1-201ENST00000561473 1744 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 TTTY25P-201ENST00000558356 1505 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 TAC1-202ENST00000346867 1011 ntAPPRIS ALT1 TSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 Y_RNA.41-201ENST00000362646 102 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC006457.1-201ENST00000420733 392 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 TTC4P1-201ENST00000427137 1158 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 RPS23P8-201ENST00000429775 330 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 EIF3IP1-201ENST00000433048 967 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC024082.1-201ENST00000435250 699 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 UBE2Q1-AS1-201ENST00000441613 432 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AL772284.1-201ENST00000443421 905 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 OR7E102P-201ENST00000448855 1015 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC018638.4-201ENST00000465971 1150 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 RPS7P11-201ENST00000484240 586 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC093663.2-201ENST00000484625 313 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC074386.1-206ENST00000487102 761 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 RPS12P31-201ENST00000491419 398 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 GSTO3P-201ENST00000504733 718 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 SLC5A4P1-201ENST00000532944 612 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AL049833.1-201ENST00000557745 840 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AP000436.1-201ENST00000605239 800 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AC126118.1-201ENST00000607744 628 ntBASIC8.53□□□□□ -1.04
FOXR1Q6PIV2 AL121583.1-201ENST00000612444 682 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms