Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC8.85□□□□□ -0.99
ERCC3P19447 AC105052.2-201ENST00000434317 794 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 AC004854.1-201ENST00000440356 349 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 RPS10P28-201ENST00000480396 498 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 AL445187.1-201ENST00000502685 260 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 AC093770.1-201ENST00000511559 571 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 RNU5A-7P-201ENST00000515979 116 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 MTND6P19-201ENST00000519399 524 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC8.85□□□□□ -0.99
ERCC3P19447 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 NF1P12-201ENST00000549593 583 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC8.85□□□□□ -0.99
ERCC3P19447 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC8.85□□□□□ -0.99
ERCC3P19447 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.85□□□□□ -0.99
ERCC3P19447 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 VEZF1P1-201ENST00000423931 1541 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.85□□□□□ -0.99
ERCC3P19447 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.84□□□□□ -0.99
ERCC3P19447 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.84□□□□□ -0.99
ERCC3P19447 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.84□□□□□ -0.99
ERCC3P19447 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
ERCC3P19447 RNA5SP302-201ENST00000364896 100 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 AC007618.1-201ENST00000366455 732 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
ERCC3P19447 SNORA10B-201ENST00000384458 133 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
ERCC3P19447 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.84□□□□□ -0.99
ERCC3P19447 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 RN7SKP30-201ENST00000411373 334 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AL139135.1-201ENST00000412675 209 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC106883.1-201ENST00000418805 562 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC8.84□□□□□ -0.99
ERCC3P19447 AL606490.7-201ENST00000433136 191 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC8.84□□□□□ -0.99
ERCC3P19447 RPL32P14-201ENST00000463196 378 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 RN7SL55P-201ENST00000464534 297 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC105918.1-201ENST00000474399 838 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.84□□□□□ -0.99
ERCC3P19447 RPL22-208ENST00000497965 786 ntTSL 2 BASIC8.84□□□□□ -0.99
ERCC3P19447 PPM1AP1-201ENST00000502740 1135 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 HMGB1P3-201ENST00000502802 616 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC096571.1-202ENST00000506634 735 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC8.84□□□□□ -0.99
ERCC3P19447 MTCO1P4-201ENST00000520516 1409 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC004923.2-201ENST00000529649 369 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 OR7E87P-201ENST00000532397 929 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AP005597.1-201ENST00000534192 802 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC139697.1-201ENST00000548429 745 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC8.84□□□□□ -0.99
ERCC3P19447 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC024614.1-201ENST00000577546 307 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC004852.1-201ENST00000605206 154 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC103724.4-201ENST00000605981 292 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 AC012213.4-201ENST00000606457 354 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ERCC3P19447 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
ERCC3P19447 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
ERCC3P19447 NF1P7-201ENST00000612076 1530 ntBASIC8.84□□□□□ -0.99
ERCC3P19447 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC8.84□□□□□ -0.99
ERCC3P19447 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.84□□□□□ -0.99
ERCC3P19447 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.84□□□□□ -0.99
ERCC3P19447 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.84□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms