Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
ALDH1A1P00352 C1QTNF3-AMACR-201ENST00000382079 3424 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
ALDH1A1P00352 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 PPP4R1L-202ENST00000334187 2746 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 TRIM52-205ENST00000611618 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 AL022323.2-201ENST00000623239 3000 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 OR6C69P-201ENST00000394268 893 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AL353151.1-201ENST00000402406 604 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 NIFKP3-201ENST00000417799 865 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 SLAMF6P1-201ENST00000451067 602 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC092001.1-201ENST00000453012 261 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC100843.1-201ENST00000475372 550 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 RPL9P33-201ENST00000484311 566 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 RNA5SP101-201ENST00000517036 108 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC092868.1-201ENST00000557949 802 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC127029.1-201ENST00000560822 237 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 DPPA2P4-201ENST00000563717 878 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC142086.3-201ENST00000563896 802 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC107993.1-201ENST00000591343 684 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 MTCYBP22-201ENST00000603788 447 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AL163642.2-201ENST00000604722 1019 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AL021707.7-201ENST00000607991 416 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC012488.1-201ENST00000611221 640 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 MIR6070-201ENST00000613967 103 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC092794.2-201ENST00000620933 563 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 AC004009.2-201ENST00000623016 728 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 SLC22A24-203ENST00000612278 2101 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 MRPL1-201ENST00000315567 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 AP000446.1-201ENST00000530045 2643 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 NCAPD2P1-201ENST00000432906 1801 ntBASIC9.26□□□□□ -0.93
ALDH1A1P00352 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 TCF4-211ENST00000561992 2184 ntTSL 2 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 DAB2-201ENST00000320816 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
ALDH1A1P00352 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC9.26□□□□□ -0.93
ALDH1A1P00352 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALDH1A1P00352 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC9.25□□□□□ -0.93
ALDH1A1P00352 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALDH1A1P00352 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC9.25□□□□□ -0.93
ALDH1A1P00352 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC9.25□□□□□ -0.93
ALDH1A1P00352 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALDH1A1P00352 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALDH1A1P00352 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC9.25□□□□□ -0.93
ALDH1A1P00352 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC9.25□□□□□ -0.93
ALDH1A1P00352 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALDH1A1P00352 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC9.25□□□□□ -0.93
ALDH1A1P00352 OR10D1P-201ENST00000355343 936 ntBASIC9.25□□□□□ -0.93
ALDH1A1P00352 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
ALDH1A1P00352 Y_RNA.553-201ENST00000384670 102 ntBASIC9.25□□□□□ -0.93
ALDH1A1P00352 GLS-204ENST00000409428 816 ntTSL 2 BASIC9.25□□□□□ -0.93
ALDH1A1P00352 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC9.25□□□□□ -0.93
ALDH1A1P00352 RPL12P27-201ENST00000414870 496 ntBASIC9.25□□□□□ -0.93
ALDH1A1P00352 SNX18P14-201ENST00000429308 574 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms