Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 RN7SL187P-201ENST00000495587 303 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AL671862.1-201ENST00000515851 349 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 RNA5SP438-201ENST00000516561 112 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AL356800.1-201ENST00000553339 735 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AC004943.1-203ENST00000624370 1074 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AC235565.1-201ENST00000456962 1325 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 CCDC90B-214ENST00000529689 4014 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 C4BPAP1-201ENST00000415474 1893 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 RN7SKP160-201ENST00000363804 340 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 RPL7AP23-201ENST00000482625 776 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 AC073333.2-201ENST00000603589 769 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 IGLCOR22-2-201ENST00000605398 313 ntBASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
RIMBP3Q9UFD9 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 CYP2G2P-201ENST00000594920 1485 ntBASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 SMG1P5-202ENST00000529428 4219 ntBASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 SMG1P2-201ENST00000566127 4221 ntBASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 RNA5SP172-201ENST00000365061 118 ntBASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 ACA64.1-201ENST00000459171 127 ntBASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 AC120036.3-201ENST00000517826 292 ntBASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
RIMBP3Q9UFD9 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 TMSB4XP2-201ENST00000335179 210 ntBASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 RNU1-150P-201ENST00000362491 162 ntBASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 UBA52P7-201ENST00000486088 380 ntBASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 RNA5SP206-201ENST00000516703 121 ntBASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 AL035661.1-201ENST00000620459 1144 ntBASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 ALPK1-205ENST00000504176 5203 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 ADIPOQ-202ENST00000444204 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 AL590763.1-201ENST00000398297 1545 ntBASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RIMBP3Q9UFD9 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms