Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SVIL-AS1-212ENST00000623175 401 ntTSL 1 (best)8.62□□□□□ -1.036e-8■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-207ENST00000445521 188 ntTSL 48.29□□□□□ -1.086e-8■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-206ENST00000438202 652 ntTSL 28.16□□□□□ -1.16e-8■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-210ENST00000608994 315 ntTSL 57.64□□□□□ -1.196e-8■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-203ENST00000423223 507 ntTSL 26.15□□□□□ -1.436e-8■□□□□ 10.7
PRPF8Q6P2Q9 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.93□□□□□ -1.786e-8■□□□□ 10.7
PRPF8Q6P2Q9 ENOSF1-212ENST00000581906 619 ntTSL 22.82□□□□□ -1.966e-8■□□□□ 10.7
PRPF8Q6P2Q9 HMBS-223ENST00000545901 581 ntTSL 1 (best)14.31□□□□□ -0.122e-8■□□□□ 10.7
PRPF8Q6P2Q9 CENPT-227ENST00000568495 1098 ntTSL 510.53□□□□□ -0.724e-11■□□□□ 10.7
PRPF8Q6P2Q9 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.879e-8■□□□□ 10.7
PRPF8Q6P2Q9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.73□□□□□ -0.215e-8■□□□□ 10.7
PRPF8Q6P2Q9 KRT8-207ENST00000546921 542 ntTSL 413.37□□□□□ -0.275e-8■□□□□ 10.7
PRPF8Q6P2Q9 KRT8-212ENST00000549198 592 ntTSL 211.85□□□□□ -0.515e-8■□□□□ 10.7
PRPF8Q6P2Q9 KRT8-214ENST00000551318 507 ntTSL 211.81□□□□□ -0.525e-8■□□□□ 10.7
PRPF8Q6P2Q9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.55□□□□□ -0.561e-8■□□□□ 10.7
PRPF8Q6P2Q9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.712e-8■□□□□ 10.7
PRPF8Q6P2Q9 EXOC3L4-207ENST00000560925 2341 ntTSL 218.02■□□□□ 0.472e-8■□□□□ 10.7
PRPF8Q6P2Q9 TMEM94-219ENST00000581453 807 ntTSL 316.68■□□□□ 0.261e-8■□□□□ 10.7
PRPF8Q6P2Q9 TMEM94-203ENST00000577194 478 ntTSL 316.26■□□□□ 0.191e-8■□□□□ 10.7
PRPF8Q6P2Q9 RAB11B-203ENST00000598706 574 ntTSL 212.97□□□□□ -0.331e-8■□□□□ 10.7
PRPF8Q6P2Q9 TMEM94-231ENST00000584694 528 ntTSL 512.39□□□□□ -0.431e-8■□□□□ 10.7
PRPF8Q6P2Q9 MIR6785-201ENST00000618984 81 ntBASIC8.91□□□□□ -0.981e-8■□□□□ 10.7
PRPF8Q6P2Q9 TMEM94-204ENST00000577245 384 ntTSL 36.86□□□□□ -1.311e-8■□□□□ 10.7
PRPF8Q6P2Q9 FCGR2C-210ENST00000508651 542 ntTSL 45□□□□□ -1.615e-7■□□□□ 10.7
PRPF8Q6P2Q9 GIT1-209ENST00000579536 852 ntTSL 213.99□□□□□ -0.172e-6■□□□□ 10.7
PRPF8Q6P2Q9 WTAP-204ENST00000494513 635 ntTSL 52.01□□□□□ -2.091e-16■□□□□ 10.7
PRPF8Q6P2Q9 SGSM3-211ENST00000481028 367 ntTSL 210.55□□□□□ -0.721e-8■□□□□ 10.7
PRPF8Q6P2Q9 NUP188-202ENST00000464729 408 ntTSL 25.07□□□□□ -1.65e-8■□□□□ 10.7
PRPF8Q6P2Q9 PRRC2B-201ENST00000320547 4950 ntTSL 29.54□□□□□ -0.882e-9■□□□□ 10.7
PRPF8Q6P2Q9 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.512e-7■□□□□ 10.7
PRPF8Q6P2Q9 LRIF1-201ENST00000369763 3475 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.032e-7■□□□□ 10.7
PRPF8Q6P2Q9 ZNF320-208ENST00000597111 552 ntTSL 410.1□□□□□ -0.793e-11■□□□□ 10.7
PRPF8Q6P2Q9 ZNF320-206ENST00000596215 508 ntTSL 48.52□□□□□ -1.053e-11■□□□□ 10.7
PRPF8Q6P2Q9 ZNF320-202ENST00000593618 598 ntTSL 47.29□□□□□ -1.243e-11■□□□□ 10.7
PRPF8Q6P2Q9 ZNF320-210ENST00000597856 582 ntTSL 56.09□□□□□ -1.433e-11■□□□□ 10.7
PRPF8Q6P2Q9 ZNF320-211ENST00000597909 754 ntTSL 1 (best)6□□□□□ -1.453e-11■□□□□ 10.7
PRPF8Q6P2Q9 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.483e-11■□□□□ 10.7
PRPF8Q6P2Q9 ZNF320-203ENST00000594741 590 ntTSL 35.61□□□□□ -1.513e-11■□□□□ 10.7
PRPF8Q6P2Q9 ZNF320-214ENST00000601334 558 ntTSL 45.46□□□□□ -1.543e-11■□□□□ 10.7
PRPF8Q6P2Q9 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.63e-11■□□□□ 10.7
PRPF8Q6P2Q9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.516e-7■□□□□ 10.7
PRPF8Q6P2Q9 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.645e-6■□□□□ 10.7
PRPF8Q6P2Q9 APBB2-214ENST00000508593 3592 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.915e-6■□□□□ 10.7
PRPF8Q6P2Q9 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC8.01□□□□□ -1.135e-6■□□□□ 10.7
PRPF8Q6P2Q9 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.375e-6■□□□□ 10.7
PRPF8Q6P2Q9 UNC13D-204ENST00000586108 575 ntTSL 310.73□□□□□ -0.699e-10■□□□□ 10.7
PRPF8Q6P2Q9 MIB2-218ENST00000505370 809 ntTSL 220.47■□□□□ 0.877e-12■□□□□ 10.7
PRPF8Q6P2Q9 COQ8B-215ENST00000601304 883 ntTSL 315.21■□□□□ 0.028e-8■□□□□ 10.7
PRPF8Q6P2Q9 SELENOS-206ENST00000529968 556 ntTSL 223.04■■□□□ 1.283e-13■□□□□ 10.7
PRPF8Q6P2Q9 SELENOS-205ENST00000528346 655 ntTSL 318.03■□□□□ 0.483e-13■□□□□ 10.7
PRPF8Q6P2Q9 SPCS3-203ENST00000507678 2655 ntTSL 217.04■□□□□ 0.323e-13■□□□□ 10.7
PRPF8Q6P2Q9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.273e-13■□□□□ 10.7
PRPF8Q6P2Q9 SELENOS-202ENST00000526043 2444 ntTSL 216.56■□□□□ 0.243e-13■□□□□ 10.7
PRPF8Q6P2Q9 SELENOS-204ENST00000527833 856 ntTSL 213.94□□□□□ -0.183e-13■□□□□ 10.7
PRPF8Q6P2Q9 SPCS3-204ENST00000513139 589 ntTSL 212.62□□□□□ -0.393e-13■□□□□ 10.7
PRPF8Q6P2Q9 SELENOS-208ENST00000534014 355 ntTSL 212.26□□□□□ -0.453e-13■□□□□ 10.7
PRPF8Q6P2Q9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.473e-13■□□□□ 10.7
PRPF8Q6P2Q9 PRH1-205ENST00000541977 507 ntTSL 212.07□□□□□ -0.483e-13■□□□□ 10.7
PRPF8Q6P2Q9 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.673e-13■□□□□ 10.7
PRPF8Q6P2Q9 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC10.21□□□□□ -0.783e-13■□□□□ 10.7
PRPF8Q6P2Q9 TAS2R14-201ENST00000381852 1662 ntTSL 210.07□□□□□ -0.83e-13■□□□□ 10.7
PRPF8Q6P2Q9 PRR4-213ENST00000546265 534 ntTSL 59.88□□□□□ -0.833e-13■□□□□ 10.7
PRPF8Q6P2Q9 PRR4-208ENST00000541175 384 ntTSL 26.15□□□□□ -1.423e-13■□□□□ 10.7
PRPF8Q6P2Q9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.114e-6■□□□□ 10.7
PRPF8Q6P2Q9 SRRM2-206ENST00000571041 498 ntTSL 413.08□□□□□ -0.323e-47■□□□□ 10.7
PRPF8Q6P2Q9 BAIAP2-224ENST00000575989 565 ntTSL 416.59■□□□□ 0.255e-7■□□□□ 10.7
PRPF8Q6P2Q9 BAIAP2-221ENST00000575750 584 ntTSL 412.83□□□□□ -0.365e-7■□□□□ 10.7
PRPF8Q6P2Q9 NSMAF-208ENST00000519227 583 ntTSL 47.95□□□□□ -1.149e-9■□□□□ 10.6
PRPF8Q6P2Q9 NSMAF-216ENST00000523982 562 ntTSL 46.88□□□□□ -1.319e-9■□□□□ 10.6
PRPF8Q6P2Q9 PKD1P6-203ENST00000538100 705 ntTSL 318■□□□□ 0.476e-15■□□□□ 10.6
PRPF8Q6P2Q9 NPLOC4-215ENST00000574095 277 ntTSL 322.26■■□□□ 1.154e-8■□□□□ 10.6
PRPF8Q6P2Q9 DPH1-208ENST00000572214 946 ntTSL 516.78■□□□□ 0.281e-8■□□□□ 10.6
PRPF8Q6P2Q9 DPH1-205ENST00000570867 2265 ntTSL 214.94□□□□□ -0.021e-8■□□□□ 10.6
PRPF8Q6P2Q9 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.951e-7■□□□□ 10.6
PRPF8Q6P2Q9 CYB5B-203ENST00000514123 2492 ntTSL 1 (best)8.04□□□□□ -1.124e-6■□□□□ 10.6
PRPF8Q6P2Q9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.73■□□□□ 0.272e-6■□□□□ 10.6
PRPF8Q6P2Q9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.222e-6■□□□□ 10.6
PRPF8Q6P2Q9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.172e-6■□□□□ 10.6
PRPF8Q6P2Q9 PTPN7-216ENST00000492977 1595 ntTSL 1 (best)11□□□□□ -0.654e-6■□□□□ 10.6
PRPF8Q6P2Q9 ATRX-214ENST00000624166 4272 ntTSL 1 (best)9.04□□□□□ -0.964e-6■□□□□ 10.6
PRPF8Q6P2Q9 FUK-211ENST00000574784 590 ntTSL 412.57□□□□□ -0.41e-6■□□□□ 10.6
PRPF8Q6P2Q9 FUK-213ENST00000576453 539 ntTSL 512.38□□□□□ -0.431e-6■□□□□ 10.6
PRPF8Q6P2Q9 LARS2-205ENST00000431023 570 ntTSL 49.9□□□□□ -0.822e-6■□□□□ 10.6
PRPF8Q6P2Q9 LARS2-204ENST00000430399 566 ntTSL 49.53□□□□□ -0.882e-6■□□□□ 10.6
PRPF8Q6P2Q9 STUB1-210ENST00000567790 428 ntTSL 313.39□□□□□ -0.272e-10■□□□□ 10.6
PRPF8Q6P2Q9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.57■□□□□ 0.44e-8■□□□□ 10.6
PRPF8Q6P2Q9 ECHDC2-206ENST00000467988 702 ntTSL 517.08■□□□□ 0.324e-8■□□□□ 10.6
PRPF8Q6P2Q9 ECHDC2-202ENST00000371520 1606 ntTSL 1 (best)16.25■□□□□ 0.194e-8■□□□□ 10.6
PRPF8Q6P2Q9 ECHDC2-208ENST00000476477 1676 ntTSL 214.02□□□□□ -0.174e-8■□□□□ 10.6
PRPF8Q6P2Q9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.344e-8■□□□□ 10.6
PRPF8Q6P2Q9 ECHDC2-204ENST00000460612 2645 ntTSL 212.47□□□□□ -0.414e-8■□□□□ 10.6
PRPF8Q6P2Q9 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC10.89□□□□□ -0.674e-8■□□□□ 10.6
PRPF8Q6P2Q9 MTA3-219ENST00000493983 413 ntTSL 5-1.15□□□□□ -2.591e-6■□□□□ 10.6
PRPF8Q6P2Q9 TCF25-223ENST00000568870 263 ntTSL 211.49□□□□□ -0.574e-10■□□□□ 10.6
PRPF8Q6P2Q9 SLC35C2-209ENST00000484188 854 ntTSL 519.22■□□□□ 0.671e-9■□□□□ 10.6
PRPF8Q6P2Q9 DDA1-202ENST00000593466 757 ntTSL 316.65■□□□□ 0.261e-9■□□□□ 10.6
PRPF8Q6P2Q9 DDA1-204ENST00000596582 502 ntTSL 316.35■□□□□ 0.211e-9■□□□□ 10.6
PRPF8Q6P2Q9 SLC39A4-203ENST00000526658 583 ntTSL 315.54■□□□□ 0.081e-9■□□□□ 10.6
PRPF8Q6P2Q9 ANKMY1-212ENST00000411765 652 ntTSL 414.01□□□□□ -0.173e-18■□□□□ 10.6
PRPF8Q6P2Q9 DDA1-205ENST00000596925 560 ntTSL 412.83□□□□□ -0.361e-9■□□□□ 10.6
Retrieved 100 of 73,762 protein–RNA pairs in 1314.2 ms