Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
POLR2AP24928 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 PPIAP22-201ENST00000358455 498 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 PRELID1P1-201ENST00000403549 660 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 RN7SKP144-201ENST00000411108 279 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.1□□□□□ -1.11
POLR2AP24928 FABP5P1-201ENST00000423401 411 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 GTF2IP14-201ENST00000441415 586 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.1□□□□□ -1.11
POLR2AP24928 AL359839.1-201ENST00000451975 1160 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 AL049829.1-201ENST00000465411 156 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC8.1□□□□□ -1.11
POLR2AP24928 ASB8-203ENST00000535988 679 ntTSL 2 BASIC8.1□□□□□ -1.11
POLR2AP24928 AC133552.4-201ENST00000576103 676 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 AL138895.2-201ENST00000603019 178 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 AL136370.1-201ENST00000608166 691 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 AC027348.2-201ENST00000624375 642 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.09□□□□□ -1.11
POLR2AP24928 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC8.09□□□□□ -1.11
POLR2AP24928 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.09□□□□□ -1.11
POLR2AP24928 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.09□□□□□ -1.11
POLR2AP24928 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
POLR2AP24928 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.09□□□□□ -1.11
POLR2AP24928 THAP12P6-201ENST00000431978 2310 ntBASIC8.09□□□□□ -1.11
POLR2AP24928 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
POLR2AP24928 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.09□□□□□ -1.11
POLR2AP24928 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.09□□□□□ -1.11
POLR2AP24928 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.09□□□□□ -1.11
POLR2AP24928 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.09□□□□□ -1.11
POLR2AP24928 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.09□□□□□ -1.11
POLR2AP24928 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.09□□□□□ -1.11
POLR2AP24928 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.09□□□□□ -1.11
POLR2AP24928 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
POLR2AP24928 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.09□□□□□ -1.11
POLR2AP24928 RN7SL366P-201ENST00000577957 292 ntBASIC8.09□□□□□ -1.11
POLR2AP24928 MRPS5P4-201ENST00000592830 325 ntBASIC8.09□□□□□ -1.11
POLR2AP24928 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.09□□□□□ -1.11
POLR2AP24928 AC091167.5-201ENST00000605689 894 ntBASIC8.09□□□□□ -1.11
POLR2AP24928 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.09□□□□□ -1.11
POLR2AP24928 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.09□□□□□ -1.11
POLR2AP24928 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 AC022613.3-201ENST00000560740 1346 ntBASIC8.09□□□□□ -1.11
POLR2AP24928 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 DDX43P1-201ENST00000510713 1763 ntBASIC8.09□□□□□ -1.11
POLR2AP24928 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
POLR2AP24928 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
POLR2AP24928 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.12
POLR2AP24928 RNA5SP433-201ENST00000364491 114 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 RPL9P21-201ENST00000392269 505 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 MRPS21P5-201ENST00000417885 231 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 CHEK2P5-201ENST00000423877 246 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 GAPDHP51-201ENST00000426454 1000 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 CT45A11P-201ENST00000448043 1134 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.08□□□□□ -1.12
POLR2AP24928 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 RN7SL284P-201ENST00000498823 275 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 IGKV3D-25-201ENST00000519599 235 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 CTSLP2-201ENST00000580501 394 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.08□□□□□ -1.12
POLR2AP24928 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.08□□□□□ -1.12
POLR2AP24928 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.08□□□□□ -1.12
POLR2AP24928 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 AC010886.1-201ENST00000437380 2869 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.08□□□□□ -1.12
POLR2AP24928 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.08□□□□□ -1.12
POLR2AP24928 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.08□□□□□ -1.12
POLR2AP24928 RNA5SP485-201ENST00000365053 119 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.08□□□□□ -1.12
POLR2AP24928 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC8.08□□□□□ -1.12
POLR2AP24928 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC8.08□□□□□ -1.12
POLR2AP24928 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC8.08□□□□□ -1.12
POLR2AP24928 SNRPCP6-201ENST00000528310 210 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms