Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 MIR4642-201ENST00000583943 82 ntBASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 AL021807.1-201ENST00000607175 565 ntBASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 AC016394.1-201ENST00000608444 833 ntBASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 U91328.4-201ENST00000608919 517 ntBASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 AC026124.2-201ENST00000621847 656 ntBASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 AL031123.2-201ENST00000563225 3325 ntBASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSBP3Q9BWW4 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AC018880.1-201ENST00000418898 1319 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 MARK2P10-201ENST00000454959 1437 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AL365475.1-201ENST00000565135 1949 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 Y_RNA.201-201ENST00000364052 96 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 RNU1-11P-201ENST00000383975 164 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 SNORD116-9-201ENST00000384000 95 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 SNORD116-3-201ENST00000384287 95 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 SNORD116-7-201ENST00000384404 95 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 SNORD116-5-201ENST00000384462 95 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 HYALP1-201ENST00000417674 1279 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 KRR1P1-201ENST00000419430 803 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AL139415.1-201ENST00000424862 352 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 PRPS1P2-201ENST00000430496 937 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 USP9YP24-201ENST00000434374 697 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 UBE2D3P1-201ENST00000436669 444 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 CR769776.1-201ENST00000441254 787 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 USP9YP17-201ENST00000444617 696 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 NPM1P49-201ENST00000448027 714 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 ZNF736P5Y-201ENST00000451173 805 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 LRRC37A14P-201ENST00000452297 462 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AL356390.1-201ENST00000455684 397 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AC114300.1-201ENST00000502347 280 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AC010625.1-201ENST00000511296 403 ntBASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSBP3Q9BWW4 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms