Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 RPL10P18-201ENST00000519384 309 ntBASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 AC024405.1-201ENST00000532521 1042 ntBASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 RPS4XP21-201ENST00000603814 750 ntBASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 AC023513.1-201ENST00000604396 691 ntBASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 AC098590.2-201ENST00000614787 281 ntBASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 AL359263.1-201ENST00000441188 2796 ntBASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM71Q2Q1W2 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 LARP1P1-201ENST00000407692 292 ntBASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 AL022100.1-202ENST00000421214 548 ntBASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 YY1P1-201ENST00000427625 668 ntBASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 OR6C71P-201ENST00000432580 913 ntBASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 PCNPP2-201ENST00000441651 455 ntBASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 EAF2-202ENST00000451944 960 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 MINOS1P4-201ENST00000515470 318 ntBASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 PPIAP14-201ENST00000577627 496 ntBASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 AC015801.1-201ENST00000585651 153 ntBASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM71Q2Q1W2 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.16
TRIM71Q2Q1W2 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
TRIM71Q2Q1W2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.84□□□□□ -1.16
TRIM71Q2Q1W2 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
TRIM71Q2Q1W2 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
TRIM71Q2Q1W2 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
TRIM71Q2Q1W2 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 AC121334.1-201ENST00000396414 802 ntBASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 CLNS1AP1-201ENST00000435954 682 ntBASIC7.83□□□□□ -1.16
TRIM71Q2Q1W2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms