Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RPS7P12-201ENST00000422385 582 ntBASIC6.4□□□□□ -1.38
FREM3P0C091 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FREM3P0C091 AP005202.1-201ENST00000489915 867 ntBASIC6.4□□□□□ -1.38
FREM3P0C091 AC008967.1-201ENST00000504843 163 ntBASIC6.4□□□□□ -1.38
FREM3P0C091 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.4□□□□□ -1.38
FREM3P0C091 SCARNA6-201ENST00000515982 265 ntBASIC6.4□□□□□ -1.38
FREM3P0C091 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.4□□□□□ -1.38
FREM3P0C091 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.4□□□□□ -1.38
FREM3P0C091 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.4□□□□□ -1.38
FREM3P0C091 MIR4312-201ENST00000579909 76 ntBASIC6.4□□□□□ -1.38
FREM3P0C091 AL512430.4-201ENST00000603085 613 ntBASIC6.4□□□□□ -1.38
FREM3P0C091 AC063962.1-201ENST00000608199 521 ntBASIC6.4□□□□□ -1.38
FREM3P0C091 AC106795.5-201ENST00000623288 454 ntBASIC6.4□□□□□ -1.38
FREM3P0C091 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.4□□□□□ -1.38
FREM3P0C091 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.4□□□□□ -1.38
FREM3P0C091 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.4□□□□□ -1.38
FREM3P0C091 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
FREM3P0C091 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FREM3P0C091 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.4□□□□□ -1.38
FREM3P0C091 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FREM3P0C091 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.4□□□□□ -1.38
FREM3P0C091 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC6.4□□□□□ -1.39
FREM3P0C091 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
FREM3P0C091 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
FREM3P0C091 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
FREM3P0C091 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
FREM3P0C091 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
FREM3P0C091 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
FREM3P0C091 OR4C1P-202ENST00000641065 1569 ntBASIC6.4□□□□□ -1.39
FREM3P0C091 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
FREM3P0C091 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
FREM3P0C091 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.4□□□□□ -1.39
FREM3P0C091 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.4□□□□□ -1.39
FREM3P0C091 RPS10P14-201ENST00000440748 502 ntBASIC6.4□□□□□ -1.39
FREM3P0C091 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.4□□□□□ -1.39
FREM3P0C091 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.4□□□□□ -1.39
FREM3P0C091 DEFA11P-201ENST00000446470 261 ntBASIC6.4□□□□□ -1.39
FREM3P0C091 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
FREM3P0C091 RN7SL655P-201ENST00000486087 298 ntBASIC6.4□□□□□ -1.39
FREM3P0C091 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.4□□□□□ -1.39
FREM3P0C091 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.4□□□□□ -1.39
FREM3P0C091 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.4□□□□□ -1.39
FREM3P0C091 AC027271.1-201ENST00000610270 610 ntBASIC6.4□□□□□ -1.39
FREM3P0C091 AL138693.1-201ENST00000622219 129 ntBASIC6.4□□□□□ -1.39
FREM3P0C091 TSHZ2-205ENST00000626626 670 ntBASIC6.4□□□□□ -1.39
FREM3P0C091 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
FREM3P0C091 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
FREM3P0C091 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
FREM3P0C091 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
FREM3P0C091 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.4□□□□□ -1.39
FREM3P0C091 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.4□□□□□ -1.39
FREM3P0C091 AC124045.1-201ENST00000606008 1953 ntBASIC6.4□□□□□ -1.39
FREM3P0C091 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.4□□□□□ -1.39
FREM3P0C091 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.39□□□□□ -1.39
FREM3P0C091 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FREM3P0C091 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.39□□□□□ -1.39
FREM3P0C091 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.39□□□□□ -1.39
FREM3P0C091 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.39□□□□□ -1.39
FREM3P0C091 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.39□□□□□ -1.39
FREM3P0C091 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FREM3P0C091 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.39□□□□□ -1.39
FREM3P0C091 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.39□□□□□ -1.39
FREM3P0C091 FTH1P10-202ENST00000430907 550 ntBASIC6.39□□□□□ -1.39
FREM3P0C091 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.39□□□□□ -1.39
FREM3P0C091 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.39□□□□□ -1.39
FREM3P0C091 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.39□□□□□ -1.39
FREM3P0C091 RN7SL88P-201ENST00000480166 299 ntBASIC6.39□□□□□ -1.39
FREM3P0C091 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.39□□□□□ -1.39
FREM3P0C091 AC096661.1-201ENST00000515870 822 ntBASIC6.39□□□□□ -1.39
FREM3P0C091 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.39□□□□□ -1.39
FREM3P0C091 RPL10P18-201ENST00000519384 309 ntBASIC6.39□□□□□ -1.39
FREM3P0C091 AC087752.2-201ENST00000521219 281 ntBASIC6.39□□□□□ -1.39
FREM3P0C091 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.39□□□□□ -1.39
FREM3P0C091 OR4C49P-201ENST00000563891 900 ntBASIC6.39□□□□□ -1.39
FREM3P0C091 RN7SL42P-201ENST00000579786 294 ntBASIC6.39□□□□□ -1.39
FREM3P0C091 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FREM3P0C091 AC005858.3-201ENST00000624756 589 ntBASIC6.39□□□□□ -1.39
FREM3P0C091 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.39□□□□□ -1.39
FREM3P0C091 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.39□□□□□ -1.39
FREM3P0C091 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.39□□□□□ -1.39
FREM3P0C091 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
FREM3P0C091 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FREM3P0C091 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms