Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.72□□□□□ -1.33
SCN2BO60939 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SCN2BO60939 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 SNORD15A-201ENST00000384214 148 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SCN2BO60939 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SCN2BO60939 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SCN2BO60939 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 ARMC8P1-201ENST00000443069 1289 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 RPL7AP56-201ENST00000476420 791 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 AC096743.1-201ENST00000485172 319 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN2BO60939 AC106774.2-201ENST00000510266 406 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.72□□□□□ -1.33
SCN2BO60939 RN7SKP233-201ENST00000517005 110 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 OR4A21P-201ENST00000532759 944 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 UBE2CP4-201ENST00000561405 535 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 AC023827.2-201ENST00000566880 1061 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 AL109936.2-201ENST00000605350 650 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.72□□□□□ -1.33
SCN2BO60939 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN2BO60939 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN2BO60939 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN2BO60939 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN2BO60939 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SCN2BO60939 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SCN2BO60939 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCN2BO60939 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.71□□□□□ -1.33
SCN2BO60939 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCN2BO60939 SPATA31C1-201ENST00000420021 3895 ntBASIC6.71□□□□□ -1.33
SCN2BO60939 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCN2BO60939 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN2BO60939 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN2BO60939 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCN2BO60939 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SCN2BO60939 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SCN2BO60939 AL138847.1-201ENST00000258651 546 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SCN2BO60939 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.71□□□□□ -1.34
SCN2BO60939 RN7SKP85-201ENST00000411349 318 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC6.71□□□□□ -1.34
SCN2BO60939 AC017104.2-201ENST00000417000 321 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.71□□□□□ -1.34
SCN2BO60939 UQCRHP1-204ENST00000424609 274 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 OR5P4P-201ENST00000424698 917 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.71□□□□□ -1.34
SCN2BO60939 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN2BO60939 AC018892.2-201ENST00000457656 693 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 AC135721.2-201ENST00000464237 300 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 TAAR3P-201ENST00000466706 1078 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 RN7SL392P-201ENST00000473024 299 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 TAAR3P-202ENST00000481759 1025 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 RN7SL306P-201ENST00000492941 296 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 CHCHD2P7-201ENST00000508008 452 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN2BO60939 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.71□□□□□ -1.34
SCN2BO60939 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN2BO60939 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN2BO60939 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
SCN2BO60939 COX6CP11-201ENST00000555293 229 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN2BO60939 NDUFA3P4-201ENST00000560814 250 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN2BO60939 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN2BO60939 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN2BO60939 AC013731.1-201ENST00000604340 883 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.71□□□□□ -1.34
SCN2BO60939 AC010320.5-201ENST00000619124 676 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 AC087392.3-202ENST00000358446 1754 ntBASIC6.71□□□□□ -1.34
SCN2BO60939 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.71□□□□□ -1.34
SCN2BO60939 TPTE2P2-201ENST00000403471 1466 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms