Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC105275.2-201ENST00000567907 711 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC020916.2-201ENST00000591242 360 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AL357140.4-201ENST00000636827 412 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC091305.2-201ENST00000624049 1576 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 MALAT1-202ENST00000534336 8708 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 VN1R20P-201ENST00000425215 966 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 RPL6P30-201ENST00000443382 862 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC022826.1-201ENST00000519383 805 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 IGLV2-28-201ENST00000520681 304 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC090115.2-201ENST00000548060 883 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 MIR4489-201ENST00000578869 62 ntBASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD8Q9HCK8 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 CYP4F29P-201ENST00000420685 446 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 RBMY2AP-201ENST00000445405 1157 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 RBMY2CP-201ENST00000448575 1157 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 RBMY2DP-202ENST00000448881 1157 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 RBMY2BP-202ENST00000451071 1156 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC023141.9-201ENST00000458734 412 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC026254.2-201ENST00000475295 371 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC127024.6-201ENST00000621598 424 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC073488.6-201ENST00000632293 754 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 OR9K1P-201ENST00000326513 941 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 U3.18-201ENST00000390880 216 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 UBBP1-201ENST00000392399 473 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 RN7SL39P-201ENST00000462264 297 ntBASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.55□□□□□ -1.36
CHD8Q9HCK8 AC135983.3-201ENST00000528049 1226 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms