Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S3Q96PC3 AL391261.1-201ENST00000555712 1479 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC093297.3-201ENST00000607056 2517 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC112243.1-201ENST00000623949 3851 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 RNA5SP463-201ENST00000363030 120 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 RNA5SP512-201ENST00000364550 120 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 NXT2-204ENST00000372107 937 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 MIR199B-201ENST00000384849 110 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 OR10U1P-201ENST00000414690 905 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC091390.2-201ENST00000432573 374 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC016734.1-201ENST00000436998 654 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 LIN28AP2-201ENST00000445283 458 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 SNX18P8-201ENST00000455120 874 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 RN7SL687P-201ENST00000480496 285 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC084878.1-201ENST00000480555 648 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 RPL17P2-201ENST00000491913 451 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC025465.1-201ENST00000503145 797 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC015801.1-201ENST00000585651 153 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AL021918.1-201ENST00000603933 236 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC098590.2-201ENST00000614787 281 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC021422.1-201ENST00000621212 473 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 SNORA43.5-201ENST00000631270 138 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 AC073488.5-201ENST00000631993 754 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 MIR3120-201ENST00000636555 81 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 SF3A3P1-201ENST00000446317 1477 ntBASIC5.32□□□□□ -1.56
AP1S3Q96PC3 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S3Q96PC3 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S3Q96PC3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms