Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 CFH-203ENST00000466229 6985 ntTSL 1 (best)2.28□□□□□ -2.042e-8■□□□□ 10.8
PRPF8Q6P2Q9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.22e-8■□□□□ 10.8
PRPF8Q6P2Q9 AMDHD2-213ENST00000566947 453 ntTSL 211.72□□□□□ -0.535e-10■□□□□ 10.8
PRPF8Q6P2Q9 GPT-204ENST00000527961 549 ntTSL 514.23□□□□□ -0.139e-8■□□□□ 10.8
PRPF8Q6P2Q9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.34■□□□□ 0.532e-7■□□□□ 10.8
PRPF8Q6P2Q9 OTUB1-205ENST00000535140 638 ntTSL 316.09■□□□□ 0.172e-7■□□□□ 10.8
PRPF8Q6P2Q9 SDF4-206ENST00000478938 2591 ntTSL 214.97□□□□□ -0.018e-7■□□□□ 10.8
PRPF8Q6P2Q9 SDF4-207ENST00000494748 3516 ntTSL 211.75□□□□□ -0.538e-7■□□□□ 10.8
PRPF8Q6P2Q9 TTLL3-203ENST00000414814 549 ntTSL 511.76□□□□□ -0.532e-7■□□□□ 10.8
PRPF8Q6P2Q9 TTLL3-212ENST00000430718 536 ntTSL 411.76□□□□□ -0.532e-7■□□□□ 10.8
PRPF8Q6P2Q9 TTLL3-205ENST00000418745 540 ntTSL 411.18□□□□□ -0.622e-7■□□□□ 10.8
PRPF8Q6P2Q9 TTLL3-206ENST00000419081 591 ntTSL 510.52□□□□□ -0.732e-7■□□□□ 10.8
PRPF8Q6P2Q9 TTLL3-219ENST00000452597 603 ntTSL 49.84□□□□□ -0.832e-7■□□□□ 10.8
PRPF8Q6P2Q9 TTLL3-217ENST00000439814 497 ntTSL 48.69□□□□□ -1.022e-7■□□□□ 10.8
PRPF8Q6P2Q9 TTLL3-216ENST00000438596 540 ntTSL 57.22□□□□□ -1.252e-7■□□□□ 10.8
PRPF8Q6P2Q9 GPT-207ENST00000534702 1300 ntTSL 519.86■□□□□ 0.773e-7■□□□□ 10.8
PRPF8Q6P2Q9 GPT-203ENST00000527165 1865 ntTSL 215.29■□□□□ 0.043e-7■□□□□ 10.8
PRPF8Q6P2Q9 RPL18-207ENST00000549533 666 ntTSL 214.96□□□□□ -0.014e-12■□□□□ 10.8
PRPF8Q6P2Q9 ZFAND2B-216ENST00000469596 532 ntTSL 57.86□□□□□ -1.151e-8■□□□□ 10.8
PRPF8Q6P2Q9 LRP1-210ENST00000556247 611 ntTSL 313.75□□□□□ -0.211e-6■□□□□ 10.8
PRPF8Q6P2Q9 FASN-203ENST00000579410 424 ntTSL 29.13□□□□□ -0.953e-15■□□□□ 10.8
PRPF8Q6P2Q9 CAPN1-219ENST00000530495 572 ntTSL 513.02□□□□□ -0.331e-6■□□□□ 10.8
PRPF8Q6P2Q9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.27e-9■□□□□ 10.7
PRPF8Q6P2Q9 GNA11-202ENST00000586180 739 ntTSL 321■□□□□ 0.957e-9■□□□□ 10.7
PRPF8Q6P2Q9 ISYNA1-209ENST00000582287 696 ntTSL 1 (best)16.65■□□□□ 0.267e-9■□□□□ 10.7
PRPF8Q6P2Q9 SCAMP3-209ENST00000497470 845 ntTSL 516.26■□□□□ 0.197e-9■□□□□ 10.7
PRPF8Q6P2Q9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.22■□□□□ 0.197e-9■□□□□ 10.7
PRPF8Q6P2Q9 SSU72-204ENST00000378726 2238 ntTSL 215.22■□□□□ 0.037e-9■□□□□ 10.7
PRPF8Q6P2Q9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.68□□□□□ -0.063e-6■□□□□ 10.7
PRPF8Q6P2Q9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.121e-11■□□□□ 10.7
PRPF8Q6P2Q9 CCDC86-202ENST00000535217 1488 ntTSL 514.04□□□□□ -0.167e-9■□□□□ 10.7
PRPF8Q6P2Q9 SCAMP3-207ENST00000480219 752 ntTSL 213.75□□□□□ -0.217e-9■□□□□ 10.7
PRPF8Q6P2Q9 GNA11-207ENST00000591301 389 ntTSL 213.31□□□□□ -0.287e-9■□□□□ 10.7
PRPF8Q6P2Q9 LRRFIP1-207ENST00000465870 1626 ntTSL 313.07□□□□□ -0.327e-9■□□□□ 10.7
PRPF8Q6P2Q9 DMKN-250ENST00000486756 811 ntTSL 412.88□□□□□ -0.357e-7■□□□□ 10.7
PRPF8Q6P2Q9 GNA11-206ENST00000590534 2676 ntTSL 212.86□□□□□ -0.357e-9■□□□□ 10.7
PRPF8Q6P2Q9 SLC22A7-208ENST00000487175 847 ntTSL 512.75□□□□□ -0.371e-11■□□□□ 10.7
PRPF8Q6P2Q9 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.44□□□□□ -0.423e-6■□□□□ 10.7
PRPF8Q6P2Q9 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.423e-6■□□□□ 10.7
PRPF8Q6P2Q9 FBXO34-203ENST00000554940 577 ntTSL 412.34□□□□□ -0.437e-9■□□□□ 10.7
PRPF8Q6P2Q9 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.447e-9■□□□□ 10.7
PRPF8Q6P2Q9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.467e-9■□□□□ 10.7
PRPF8Q6P2Q9 DMKN-265ENST00000601368 752 ntTSL 212.05□□□□□ -0.487e-7■□□□□ 10.7
PRPF8Q6P2Q9 LRRFIP1-209ENST00000473815 476 ntTSL 311.9□□□□□ -0.57e-9■□□□□ 10.7
PRPF8Q6P2Q9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.521e-11■□□□□ 10.7
PRPF8Q6P2Q9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.531e-11■□□□□ 10.7
PRPF8Q6P2Q9 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.67e-9■□□□□ 10.7
PRPF8Q6P2Q9 DMKN-243ENST00000478648 768 ntTSL 211.01□□□□□ -0.657e-7■□□□□ 10.7
PRPF8Q6P2Q9 ACAD10-218ENST00000546647 774 ntTSL 510.61□□□□□ -0.717e-9■□□□□ 10.7
PRPF8Q6P2Q9 DMKN-248ENST00000484064 658 ntTSL 210.54□□□□□ -0.727e-7■□□□□ 10.7
PRPF8Q6P2Q9 DMKN-233ENST00000470964 782 ntTSL 210.47□□□□□ -0.737e-7■□□□□ 10.7
PRPF8Q6P2Q9 COX16-204ENST00000557612 627 ntTSL 210.12□□□□□ -0.797e-9■□□□□ 10.7
PRPF8Q6P2Q9 ANKMY1-221ENST00000480230 4640 ntTSL 29.8□□□□□ -0.847e-9■□□□□ 10.7
PRPF8Q6P2Q9 ARHGAP26-214ENST00000469131 667 ntTSL 39.74□□□□□ -0.857e-9■□□□□ 10.7
PRPF8Q6P2Q9 ARHGAP26-215ENST00000469396 513 ntTSL 59.74□□□□□ -0.857e-9■□□□□ 10.7
PRPF8Q6P2Q9 ISYNA1-212ENST00000583309 371 ntTSL 29.56□□□□□ -0.887e-9■□□□□ 10.7
PRPF8Q6P2Q9 ELOB-205ENST00000572954 331 ntTSL 2 BASIC9.49□□□□□ -0.897e-9■□□□□ 10.7
PRPF8Q6P2Q9 COX16-201ENST00000389912 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.957e-9■□□□□ 10.7
PRPF8Q6P2Q9 ELOB-203ENST00000409906 991 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.967e-9■□□□□ 10.7
PRPF8Q6P2Q9 ELOB-201ENST00000262306 582 ntTSL 2 BASIC8.28□□□□□ -1.087e-9■□□□□ 10.7
PRPF8Q6P2Q9 ISYNA1-207ENST00000581672 793 ntTSL 28.14□□□□□ -1.117e-9■□□□□ 10.7
PRPF8Q6P2Q9 COX16-203ENST00000555601 384 ntTSL 37.98□□□□□ -1.137e-9■□□□□ 10.7
PRPF8Q6P2Q9 ALDH7A1-229ENST00000636892 3328 nt7.67□□□□□ -1.187e-9■□□□□ 10.7
PRPF8Q6P2Q9 ELOB-204ENST00000494946 472 ntTSL 27.58□□□□□ -1.27e-9■□□□□ 10.7
PRPF8Q6P2Q9 PRKCA-204ENST00000583361 519 ntTSL 36.83□□□□□ -1.325e-6■□□□□ 10.7
PRPF8Q6P2Q9 UBR5-203ENST00000518145 598 ntTSL 45.53□□□□□ -1.521e-11■□□□□ 10.7
PRPF8Q6P2Q9 PRKCA-205ENST00000583775 321 ntTSL 34.75□□□□□ -1.655e-6■□□□□ 10.7
PRPF8Q6P2Q9 TTC21B-206ENST00000486672 745 ntTSL 24.24□□□□□ -1.731e-18■□□□□ 10.7
PRPF8Q6P2Q9 REV1-211ENST00000481719 754 ntTSL 23.89□□□□□ -1.797e-9■□□□□ 10.7
PRPF8Q6P2Q9 TTC21B-207ENST00000489714 647 ntTSL 33.5□□□□□ -1.851e-18■□□□□ 10.7
PRPF8Q6P2Q9 UGCG-204ENST00000490110 581 ntTSL 38.48□□□□□ -1.052e-6■□□□□ 10.7
PRPF8Q6P2Q9 UGCG-205ENST00000495085 772 ntTSL 33.04□□□□□ -1.922e-6■□□□□ 10.7
PRPF8Q6P2Q9 IL32-214ENST00000528652 519 ntTSL 316.65■□□□□ 0.261e-7■□□□□ 10.7
PRPF8Q6P2Q9 TM7SF2-204ENST00000524986 729 ntTSL 316.52■□□□□ 0.231e-8■□□□□ 10.7
PRPF8Q6P2Q9 TM7SF2-203ENST00000524690 843 ntTSL 516.33■□□□□ 0.21e-8■□□□□ 10.7
PRPF8Q6P2Q9 TM7SF2-220ENST00000531029 530 ntTSL 516.31■□□□□ 0.21e-8■□□□□ 10.7
PRPF8Q6P2Q9 DHX38-203ENST00000563650 1123 ntTSL 310.43□□□□□ -0.744e-7■□□□□ 10.7
PRPF8Q6P2Q9 PHYKPL-213ENST00000506001 583 ntTSL 316.51■□□□□ 0.231e-24■□□□□ 10.7
PRPF8Q6P2Q9 PHYKPL-217ENST00000511716 562 ntTSL 38.18□□□□□ -1.11e-24■□□□□ 10.7
PRPF8Q6P2Q9 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC6.93□□□□□ -1.31e-24■□□□□ 10.7
PRPF8Q6P2Q9 TRIP12-215ENST00000479037 2938 ntTSL 1 (best)10.38□□□□□ -0.751e-6■□□□□ 10.7
PRPF8Q6P2Q9 EXOC3L4-206ENST00000560304 657 ntTSL 317.61■□□□□ 0.411e-7■□□□□ 10.7
PRPF8Q6P2Q9 TLN1-204ENST00000465002 543 ntTSL 411.89□□□□□ -0.512e-7■□□□□ 10.7
PRPF8Q6P2Q9 TRIP10-213ENST00000601303 311 ntTSL 53.82□□□□□ -1.81e-7■□□□□ 10.7
PRPF8Q6P2Q9 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.743e-7■□□□□ 10.7
PRPF8Q6P2Q9 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC10.34□□□□□ -0.753e-7■□□□□ 10.7
PRPF8Q6P2Q9 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC10.26□□□□□ -0.773e-7■□□□□ 10.7
PRPF8Q6P2Q9 HGH1-203ENST00000530074 702 ntTSL 319.9■□□□□ 0.781e-7■□□□□ 10.7
PRPF8Q6P2Q9 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.912e-7■□□□□ 10.7
PRPF8Q6P2Q9 KEAP1-207ENST00000591039 960 ntTSL 320.08■□□□□ 0.82e-8■□□□□ 10.7
PRPF8Q6P2Q9 KEAP1-208ENST00000591419 986 ntTSL 318.97■□□□□ 0.632e-8■□□□□ 10.7
PRPF8Q6P2Q9 TMED10-207ENST00000622441 612 nt18.23■□□□□ 0.518e-7■□□□□ 10.7
PRPF8Q6P2Q9 BCAM-205ENST00000589558 611 ntTSL 217.32■□□□□ 0.361e-42■□□□□ 10.7
PRPF8Q6P2Q9 KEAP1-209ENST00000592055 979 ntTSL 315.78■□□□□ 0.122e-8■□□□□ 10.7
PRPF8Q6P2Q9 KEAP1-203ENST00000585845 774 ntTSL 515.76■□□□□ 0.112e-8■□□□□ 10.7
PRPF8Q6P2Q9 POMT1-216ENST00000494883 855 ntTSL 215.02■□□□□ -08e-7■□□□□ 10.7
PRPF8Q6P2Q9 TP53I13-211ENST00000583940 726 ntAPPRIS ALT2 TSL 314.75□□□□□ -0.058e-7■□□□□ 10.7
PRPF8Q6P2Q9 GSDMD-210ENST00000531173 854 ntTSL 214.54□□□□□ -0.088e-7■□□□□ 10.7
PRPF8Q6P2Q9 TP53I13-207ENST00000580132 446 ntTSL 314.43□□□□□ -0.18e-7■□□□□ 10.7
PRPF8Q6P2Q9 IP6K2-227ENST00000479914 1077 ntTSL 1 (best)14.43□□□□□ -0.18e-7■□□□□ 10.7
Retrieved 100 of 73,762 protein–RNA pairs in 742.5 ms