Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AL390719.1-204ENST00000412397 1219 ntBASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 PNMA6B-201ENST00000538162 1200 ntBASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 DPP3P2-201ENST00000416030 1696 ntBASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms