Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLCA3PQ9Y6N3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.83■□□□□ 0.61
CLCA3PQ9Y6N3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLCA3PQ9Y6N3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AL390719.1-204ENST00000412397 1219 ntBASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCA3PQ9Y6N3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 PNMA6B-201ENST00000538162 1200 ntBASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCA3PQ9Y6N3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 DPP3P2-201ENST00000416030 1696 ntBASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCA3PQ9Y6N3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms