Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1G3Q9Y6M4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.58■□□□□ 0.73
CSNK1G3Q9Y6M4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK1G3Q9Y6M4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.58■□□□□ 0.73
CSNK1G3Q9Y6M4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.58■□□□□ 0.73
CSNK1G3Q9Y6M4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.58■□□□□ 0.73
CSNK1G3Q9Y6M4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
CSNK1G3Q9Y6M4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 AF186192.3-201ENST00000583427 947 ntBASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 AC005229.4-201ENST00000610085 2198 ntBASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CSNK1G3Q9Y6M4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 HTR7P1-201ENST00000538670 1336 ntBASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CSNK1G3Q9Y6M4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 FAM210CP-201ENST00000445714 574 ntBASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 AC004264.1-201ENST00000608354 794 ntBASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 AC124283.5-201ENST00000624661 1809 ntBASIC19.55■□□□□ 0.72
CSNK1G3Q9Y6M4 PTBP1P-201ENST00000554374 1601 ntBASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms