Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GPC6Q9Y625 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GPC6Q9Y625 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
GPC6Q9Y625 SMG8-203ENST00000578922 2178 ntBASIC18.84■□□□□ 0.61
GPC6Q9Y625 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC6Q9Y625 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
GPC6Q9Y625 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.84■□□□□ 0.61
GPC6Q9Y625 AL137784.2-201ENST00000607332 1000 ntBASIC18.84■□□□□ 0.61
GPC6Q9Y625 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GPC6Q9Y625 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC6Q9Y625 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC6Q9Y625 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPC6Q9Y625 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.83■□□□□ 0.61
GPC6Q9Y625 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.83■□□□□ 0.61
GPC6Q9Y625 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GPC6Q9Y625 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPC6Q9Y625 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GPC6Q9Y625 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPC6Q9Y625 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GPC6Q9Y625 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.83■□□□□ 0.61
GPC6Q9Y625 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.83■□□□□ 0.61
GPC6Q9Y625 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.83■□□□□ 0.61
GPC6Q9Y625 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
GPC6Q9Y625 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GPC6Q9Y625 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPC6Q9Y625 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC6Q9Y625 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC6Q9Y625 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 MFSD11-216ENST00000590393 1141 ntBASIC18.83■□□□□ 0.6
GPC6Q9Y625 AC011767.1-201ENST00000617410 1153 ntBASIC18.83■□□□□ 0.6
GPC6Q9Y625 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GPC6Q9Y625 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GPC6Q9Y625 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
GPC6Q9Y625 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
GPC6Q9Y625 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 TERF1P5-201ENST00000477545 1207 ntBASIC18.82■□□□□ 0.6
GPC6Q9Y625 FAM21FP-204ENST00000608637 956 ntBASIC18.82■□□□□ 0.6
GPC6Q9Y625 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.82■□□□□ 0.6
GPC6Q9Y625 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 BX323043.1-201ENST00000641006 1765 ntBASIC18.82■□□□□ 0.6
GPC6Q9Y625 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
GPC6Q9Y625 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC6Q9Y625 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GPC6Q9Y625 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.82■□□□□ 0.6
GPC6Q9Y625 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 CDV3P1-201ENST00000471403 739 ntBASIC18.81■□□□□ 0.6
GPC6Q9Y625 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 IKBKGP1-201ENST00000612193 1073 ntBASIC18.81■□□□□ 0.6
GPC6Q9Y625 AC092437.1-201ENST00000624794 1048 ntBASIC18.81■□□□□ 0.6
GPC6Q9Y625 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 AC013268.1-206ENST00000638368 961 ntBASIC18.81■□□□□ 0.6
GPC6Q9Y625 AC112229.1-201ENST00000639295 961 ntBASIC18.81■□□□□ 0.6
GPC6Q9Y625 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC6Q9Y625 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GPC6Q9Y625 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC6Q9Y625 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms