Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 HLA-B-256ENST00000639848 1089 ntBASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PCDHB13Q9Y5F0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 SLC25A24-204ENST00000569674 2357 ntBASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB13Q9Y5F0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 AL390719.1-204ENST00000412397 1219 ntBASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 AC005829.2-201ENST00000571422 1056 ntBASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 KRT16P6-202ENST00000425692 1426 ntBASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDHB13Q9Y5F0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHB13Q9Y5F0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 AC060766.5-201ENST00000590539 871 ntBASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHB13Q9Y5F0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms