Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 AC010331.1-201ENST00000611423 582 ntBASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB9Q9Y5E1 SMG8-203ENST00000578922 2178 ntBASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 LINC01006-201ENST00000333319 2292 ntBASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB9Q9Y5E1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB9Q9Y5E1 PTBP1P-201ENST00000554374 1601 ntBASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 GABARAPL3-202ENST00000624044 1851 ntBASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDHB9Q9Y5E1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.27■□□□□ 0.83
PCDHB9Q9Y5E1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB9Q9Y5E1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB9Q9Y5E1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB9Q9Y5E1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 KRT18P21-201ENST00000515767 1272 ntBASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHB9Q9Y5E1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms