Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 AC116050.2-201ENST00000612102 1779 ntBASIC18.86■□□□□ 0.61
AP4S1Q9Y587 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 AC090340.1-201ENST00000620778 4980 ntBASIC18.85■□□□□ 0.61
AP4S1Q9Y587 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 AL032819.2-201ENST00000624543 2162 ntBASIC18.85■□□□□ 0.61
AP4S1Q9Y587 AC020763.4-201ENST00000623414 4170 ntBASIC18.85■□□□□ 0.61
AP4S1Q9Y587 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP4S1Q9Y587 AC007613.1-201ENST00000572811 2597 ntBASIC18.85■□□□□ 0.61
AP4S1Q9Y587 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 POU5F1P4-201ENST00000413175 1085 ntBASIC18.84■□□□□ 0.61
AP4S1Q9Y587 BX842568.3-201ENST00000418104 571 ntBASIC18.84■□□□□ 0.61
AP4S1Q9Y587 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 AC008175.2-201ENST00000612840 297 ntBASIC18.84■□□□□ 0.61
AP4S1Q9Y587 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP4S1Q9Y587 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP4S1Q9Y587 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.83■□□□□ 0.61
AP4S1Q9Y587 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP4S1Q9Y587 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
AP4S1Q9Y587 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP4S1Q9Y587 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
AP4S1Q9Y587 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP4S1Q9Y587 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.83■□□□□ 0.61
AP4S1Q9Y587 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP4S1Q9Y587 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 AC245052.3-201ENST00000450182 901 ntBASIC18.83■□□□□ 0.6
AP4S1Q9Y587 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.83■□□□□ 0.6
AP4S1Q9Y587 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
AP4S1Q9Y587 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4S1Q9Y587 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.82■□□□□ 0.6
AP4S1Q9Y587 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
AP4S1Q9Y587 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4S1Q9Y587 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.82■□□□□ 0.6
AP4S1Q9Y587 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4S1Q9Y587 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4S1Q9Y587 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP4S1Q9Y587 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms