Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 RBM17P2-201ENST00000616397 1405 ntBASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
UBE2D4Q9Y2X8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 AC110285.6-201ENST00000617652 491 ntBASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2D4Q9Y2X8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 PGM5P4-201ENST00000421970 445 ntBASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 CDV3P1-201ENST00000471403 739 ntBASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D4Q9Y2X8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms