Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.39■□□□□ 0.85
FNDC3AQ9Y2H6 AC092368.3-202ENST00000574180 1591 ntBASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 AC233263.1-201ENST00000578059 224 ntBASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 AC073314.1-201ENST00000568729 2216 ntBASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.38■□□□□ 0.85
FNDC3AQ9Y2H6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 LINC01006-201ENST00000333319 2292 ntBASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 MIR2861-201ENST00000636310 90 ntBASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC3AQ9Y2H6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
FNDC3AQ9Y2H6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 KRT18P68-201ENST00000392293 1000 ntBASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 KRT17P3-201ENST00000420566 1262 ntBASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 SOX15-203ENST00000570788 1093 ntBASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 MIR4497-201ENST00000583208 89 ntBASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FNDC3AQ9Y2H6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms