Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 AC110285.5-201ENST00000611501 352 ntBASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
UBQLN1Q9UMX0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN1Q9UMX0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 AP005212.1-201ENST00000581547 1997 ntBASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN1Q9UMX0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN1Q9UMX0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 AC008550.1-201ENST00000511500 884 ntBASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 FEM1AP1-201ENST00000431297 1995 ntBASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN1Q9UMX0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN1Q9UMX0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms