Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 TSPY15P-201ENST00000457163 923 ntBASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42EP3Q9UKI2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 AC116050.2-201ENST00000612102 1779 ntBASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 KRT18P35-201ENST00000510488 1269 ntBASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 AC026471.5-201ENST00000615068 467 ntBASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP3Q9UKI2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 MMP23A-201ENST00000234610 1017 ntBASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 AL355355.2-201ENST00000442321 338 ntBASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 AL049597.2-201ENST00000565575 961 ntBASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 RN7SL850P-201ENST00000579959 291 ntBASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP3Q9UKI2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDC42EP3Q9UKI2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 AP003071.4-201ENST00000562276 1284 ntBASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC42EP3Q9UKI2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms