Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC005229.4-201ENST00000610085 2198 ntBASIC20.38■□□□□ 0.85
EBF1Q9UH73 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 AC026471.5-201ENST00000615068 467 ntBASIC20.38■□□□□ 0.85
EBF1Q9UH73 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 AL121829.2-201ENST00000620908 328 ntBASIC20.38■□□□□ 0.85
EBF1Q9UH73 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.38■□□□□ 0.85
EBF1Q9UH73 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
EBF1Q9UH73 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EBF1Q9UH73 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EBF1Q9UH73 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EBF1Q9UH73 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
EBF1Q9UH73 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EBF1Q9UH73 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
EBF1Q9UH73 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EBF1Q9UH73 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EBF1Q9UH73 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EBF1Q9UH73 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.37■□□□□ 0.85
EBF1Q9UH73 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.37■□□□□ 0.85
EBF1Q9UH73 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
EBF1Q9UH73 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EBF1Q9UH73 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
EBF1Q9UH73 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
EBF1Q9UH73 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EBF1Q9UH73 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EBF1Q9UH73 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
EBF1Q9UH73 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.36■□□□□ 0.85
EBF1Q9UH73 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.36■□□□□ 0.85
EBF1Q9UH73 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.36■□□□□ 0.85
EBF1Q9UH73 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.36■□□□□ 0.85
EBF1Q9UH73 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.36■□□□□ 0.85
EBF1Q9UH73 AL353708.3-201ENST00000610272 989 ntBASIC20.36■□□□□ 0.85
EBF1Q9UH73 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EBF1Q9UH73 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
EBF1Q9UH73 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.35■□□□□ 0.85
EBF1Q9UH73 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 AL353807.1-201ENST00000427475 662 ntBASIC20.35■□□□□ 0.85
EBF1Q9UH73 KRT16P5-201ENST00000455284 522 ntBASIC20.35■□□□□ 0.85
EBF1Q9UH73 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.35■□□□□ 0.85
EBF1Q9UH73 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
EBF1Q9UH73 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.35■□□□□ 0.85
EBF1Q9UH73 AP003071.4-201ENST00000562276 1284 ntBASIC20.35■□□□□ 0.85
EBF1Q9UH73 AF186192.3-201ENST00000583427 947 ntBASIC20.35■□□□□ 0.85
EBF1Q9UH73 AL391422.3-201ENST00000603791 2761 ntBASIC20.35■□□□□ 0.85
EBF1Q9UH73 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.35■□□□□ 0.85
EBF1Q9UH73 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.35■□□□□ 0.85
EBF1Q9UH73 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EBF1Q9UH73 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
EBF1Q9UH73 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.34■□□□□ 0.85
EBF1Q9UH73 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.34■□□□□ 0.85
EBF1Q9UH73 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.34■□□□□ 0.85
EBF1Q9UH73 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.34■□□□□ 0.85
EBF1Q9UH73 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EBF1Q9UH73 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.34■□□□□ 0.85
EBF1Q9UH73 CD177P1-201ENST00000606252 935 ntBASIC20.34■□□□□ 0.85
EBF1Q9UH73 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
EBF1Q9UH73 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EBF1Q9UH73 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.34■□□□□ 0.85
EBF1Q9UH73 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EBF1Q9UH73 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms