Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 DUX4L2-201ENST00000561772 1275 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 RARRES2P6-201ENST00000567333 442 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.66■□□□□ 0.42
NLKQ9UBE8 AC087623.3-201ENST00000607047 1098 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 AC008175.2-201ENST00000612840 297 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
NLKQ9UBE8 DUX4L6-201ENST00000626483 1275 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 DUX4L1-201ENST00000627662 1275 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 DUX4L8-201ENST00000629013 1275 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 DUX4L3-201ENST00000630187 1275 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 DUX4L7-201ENST00000630678 1275 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 DUX4L5-201ENST00000630834 1275 ntBASIC17.66■□□□□ 0.42
NLKQ9UBE8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.66■□□□□ 0.42
NLKQ9UBE8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NLKQ9UBE8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
NLKQ9UBE8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 AC138907.5-202ENST00000569484 235 ntBASIC17.65■□□□□ 0.42
NLKQ9UBE8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 AC104187.1-201ENST00000607510 612 ntBASIC17.65■□□□□ 0.42
NLKQ9UBE8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.65■□□□□ 0.42
NLKQ9UBE8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NLKQ9UBE8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NLKQ9UBE8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NLKQ9UBE8 AC004854.2-201ENST00000608450 1441 ntBASIC17.64■□□□□ 0.42
NLKQ9UBE8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 AC007613.1-201ENST00000572811 2597 ntBASIC17.64■□□□□ 0.41
NLKQ9UBE8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.64■□□□□ 0.41
NLKQ9UBE8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NLKQ9UBE8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NLKQ9UBE8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NLKQ9UBE8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NLKQ9UBE8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NLKQ9UBE8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NLKQ9UBE8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NLKQ9UBE8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NLKQ9UBE8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NLKQ9UBE8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
NLKQ9UBE8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms