Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 HTR7P1-201ENST00000538670 1336 ntBASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 AC211429.1-201ENST00000415277 523 ntBASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.36■□□□□ 0.69
LRIT1Q9P2V4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 AC004264.1-201ENST00000608354 794 ntBASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 AC006128.1-201ENST00000624704 1661 ntBASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRIT1Q9P2V4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 KRT8P17-201ENST00000453110 1448 ntBASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 AF186192.3-201ENST00000583427 947 ntBASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRIT1Q9P2V4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.33■□□□□ 0.69
LRIT1Q9P2V4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRIT1Q9P2V4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.33■□□□□ 0.69
LRIT1Q9P2V4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRIT1Q9P2V4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRIT1Q9P2V4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LRIT1Q9P2V4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 AL353807.1-201ENST00000427475 662 ntBASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.32■□□□□ 0.68
LRIT1Q9P2V4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIT1Q9P2V4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRIT1Q9P2V4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
LRIT1Q9P2V4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.31■□□□□ 0.68
LRIT1Q9P2V4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIT1Q9P2V4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRIT1Q9P2V4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRIT1Q9P2V4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRIT1Q9P2V4 TSPY15P-201ENST00000457163 923 ntBASIC19.31■□□□□ 0.68
LRIT1Q9P2V4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms