Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TREM2Q9NZC2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 AL020996.1-203ENST00000536896 2307 ntBASIC17.21■□□□□ 0.35
TREM2Q9NZC2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TREM2Q9NZC2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TREM2Q9NZC2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
TREM2Q9NZC2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.21■□□□□ 0.34
TREM2Q9NZC2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TREM2Q9NZC2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TREM2Q9NZC2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.21■□□□□ 0.34
TREM2Q9NZC2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 ESRRAP1-201ENST00000400596 1257 ntBASIC17.2■□□□□ 0.34
TREM2Q9NZC2 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 AC066615.1-201ENST00000640911 628 ntBASIC17.2■□□□□ 0.34
TREM2Q9NZC2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TREM2Q9NZC2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 AC008687.6-201ENST00000596318 630 ntBASIC17.19■□□□□ 0.34
TREM2Q9NZC2 ITM2C-210ENST00000620962 501 ntBASIC17.19■□□□□ 0.34
TREM2Q9NZC2 MIR2861-201ENST00000636310 90 ntBASIC17.19■□□□□ 0.34
TREM2Q9NZC2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.19■□□□□ 0.34
TREM2Q9NZC2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TREM2Q9NZC2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms