Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 DUSP5P2-201ENST00000426873 1033 ntBASIC22.73■■□□□ 1.23
RNF216Q9NWF9 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 AC083880.1-201ENST00000608266 535 ntBASIC22.73■■□□□ 1.23
RNF216Q9NWF9 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 AC009039.2-201ENST00000624524 529 ntBASIC22.73■■□□□ 1.23
RNF216Q9NWF9 AP006294.2-201ENST00000641667 209 ntBASIC22.73■■□□□ 1.23
RNF216Q9NWF9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 AC003102.1-202ENST00000563394 1796 ntBASIC22.73■■□□□ 1.23
RNF216Q9NWF9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.73■■□□□ 1.23
RNF216Q9NWF9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 EAF2-202ENST00000451944 960 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 CAB39P1-201ENST00000502277 460 ntBASIC22.72■■□□□ 1.23
RNF216Q9NWF9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RNF216Q9NWF9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF216Q9NWF9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.7■■□□□ 1.23
RNF216Q9NWF9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RNF216Q9NWF9 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.7■■□□□ 1.23
RNF216Q9NWF9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 DUXAP7-201ENST00000431038 689 ntBASIC22.7■■□□□ 1.22
RNF216Q9NWF9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 AC008687.6-201ENST00000596318 630 ntBASIC22.7■■□□□ 1.22
RNF216Q9NWF9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 AL118556.2-201ENST00000614375 824 ntBASIC22.7■■□□□ 1.22
RNF216Q9NWF9 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
RNF216Q9NWF9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 ESRRAP1-201ENST00000400596 1257 ntBASIC22.69■■□□□ 1.22
RNF216Q9NWF9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC22.69■■□□□ 1.22
RNF216Q9NWF9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms