Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 RPS2P4-201ENST00000476944 856 ntBASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 AC008550.1-201ENST00000511500 884 ntBASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
GPCPD1Q9NPB8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 AL121829.2-201ENST00000620908 328 ntBASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 AC073314.1-201ENST00000568729 2216 ntBASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.18■■□□□ 1.3
GPCPD1Q9NPB8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 PRKY-204ENST00000533551 1019 ntBASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GPCPD1Q9NPB8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 AC133681.1-201ENST00000465482 601 ntBASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 AC020907.5-201ENST00000624372 1936 ntBASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPCPD1Q9NPB8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 Z99916.2-201ENST00000604037 246 ntBASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 AC110285.5-201ENST00000611501 352 ntBASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.15■■□□□ 1.3
GPCPD1Q9NPB8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
GPCPD1Q9NPB8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GPCPD1Q9NPB8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms