Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CD248Q9HCU0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.9■□□□□ 0.94
CD248Q9HCU0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CD248Q9HCU0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD248Q9HCU0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CD248Q9HCU0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CD248Q9HCU0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CD248Q9HCU0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CD248Q9HCU0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.89■□□□□ 0.94
CD248Q9HCU0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.89■□□□□ 0.94
CD248Q9HCU0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.89■□□□□ 0.94
CD248Q9HCU0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.89■□□□□ 0.93
CD248Q9HCU0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD248Q9HCU0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.89■□□□□ 0.93
CD248Q9HCU0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD248Q9HCU0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD248Q9HCU0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD248Q9HCU0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD248Q9HCU0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.89■□□□□ 0.93
CD248Q9HCU0 KRT18P68-201ENST00000392293 1000 ntBASIC20.89■□□□□ 0.93
CD248Q9HCU0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CD248Q9HCU0 AC007322.3-201ENST00000426526 701 ntBASIC20.89■□□□□ 0.93
CD248Q9HCU0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.89■□□□□ 0.93
CD248Q9HCU0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CD248Q9HCU0 AC142381.4-202ENST00000563973 229 ntBASIC20.89■□□□□ 0.93
CD248Q9HCU0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CD248Q9HCU0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
CD248Q9HCU0 AC098818.2-201ENST00000564925 2320 ntBASIC20.89■□□□□ 0.93
CD248Q9HCU0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CD248Q9HCU0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD248Q9HCU0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD248Q9HCU0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.88■□□□□ 0.93
CD248Q9HCU0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CD248Q9HCU0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CD248Q9HCU0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.88■□□□□ 0.93
CD248Q9HCU0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.88■□□□□ 0.93
CD248Q9HCU0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.88■□□□□ 0.93
CD248Q9HCU0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.88■□□□□ 0.93
CD248Q9HCU0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD248Q9HCU0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.88■□□□□ 0.93
CD248Q9HCU0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CD248Q9HCU0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.87■□□□□ 0.93
CD248Q9HCU0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.87■□□□□ 0.93
CD248Q9HCU0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 AC018445.3-201ENST00000624177 1945 ntBASIC20.87■□□□□ 0.93
CD248Q9HCU0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CD248Q9HCU0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.87■□□□□ 0.93
CD248Q9HCU0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CD248Q9HCU0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.87■□□□□ 0.93
CD248Q9HCU0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD248Q9HCU0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CD248Q9HCU0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD248Q9HCU0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD248Q9HCU0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CD248Q9HCU0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD248Q9HCU0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD248Q9HCU0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD248Q9HCU0 AL158047.1-201ENST00000445918 881 ntBASIC20.86■□□□□ 0.93
CD248Q9HCU0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms