Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 AC125437.2-201ENST00000625180 2167 ntBASIC19.11■□□□□ 0.65
BRF2Q9HAW0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 AC105036.2-201ENST00000569468 176 ntBASIC19.11■□□□□ 0.65
BRF2Q9HAW0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRF2Q9HAW0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 MIR663A-201ENST00000385250 93 ntBASIC19.1■□□□□ 0.65
BRF2Q9HAW0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
BRF2Q9HAW0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 AP001271.2-201ENST00000624018 1556 ntBASIC19.09■□□□□ 0.65
BRF2Q9HAW0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRF2Q9HAW0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BRF2Q9HAW0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRF2Q9HAW0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
BRF2Q9HAW0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.08■□□□□ 0.65
BRF2Q9HAW0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRF2Q9HAW0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRF2Q9HAW0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 CROCCP5-201ENST00000436658 830 ntBASIC19.08■□□□□ 0.64
BRF2Q9HAW0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BRF2Q9HAW0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRF2Q9HAW0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms