Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 ABHD17AP1-201ENST00000358206 933 ntBASIC23.59■■□□□ 1.37
RNF41Q9H4P4 RPS2P52-201ENST00000469610 820 ntBASIC23.59■■□□□ 1.37
RNF41Q9H4P4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 AC006058.3-201ENST00000606217 1069 ntBASIC23.59■■□□□ 1.37
RNF41Q9H4P4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF41Q9H4P4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF41Q9H4P4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF41Q9H4P4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
RNF41Q9H4P4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF41Q9H4P4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.58■■□□□ 1.36
RNF41Q9H4P4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RNF41Q9H4P4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF41Q9H4P4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 ITM2C-210ENST00000620962 501 ntBASIC23.57■■□□□ 1.36
RNF41Q9H4P4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF41Q9H4P4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF41Q9H4P4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 AC128676.1-201ENST00000454392 318 ntBASIC23.55■■□□□ 1.36
RNF41Q9H4P4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 AC069544.1-201ENST00000609399 999 ntBASIC23.55■■□□□ 1.36
RNF41Q9H4P4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF41Q9H4P4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 KRT18P29-201ENST00000397031 1267 ntBASIC23.54■■□□□ 1.36
RNF41Q9H4P4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
RNF41Q9H4P4 AL121906.2-201ENST00000621597 723 ntBASIC23.54■■□□□ 1.36
RNF41Q9H4P4 AC073648.6-201ENST00000641589 218 ntBASIC23.54■■□□□ 1.36
RNF41Q9H4P4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms