Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 ECEL1P2-202ENST00000465689 757 ntBASIC20.11■□□□□ 0.81
CHRDQ9H2X0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CHRDQ9H2X0 KRT8P20-201ENST00000423953 1409 ntBASIC20.1■□□□□ 0.81
CHRDQ9H2X0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 AC233723.2-201ENST00000623798 2106 ntBASIC20.1■□□□□ 0.81
CHRDQ9H2X0 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.1■□□□□ 0.81
CHRDQ9H2X0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHRDQ9H2X0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 BX664615.1-201ENST00000443558 458 ntBASIC20.09■□□□□ 0.81
CHRDQ9H2X0 B3GAT3P1-201ENST00000471720 806 ntBASIC20.09■□□□□ 0.81
CHRDQ9H2X0 AC128688.1-201ENST00000487626 519 ntBASIC20.09■□□□□ 0.81
CHRDQ9H2X0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 AC022616.7-201ENST00000525383 220 ntBASIC20.09■□□□□ 0.81
CHRDQ9H2X0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 LINC01238-205ENST00000567549 1107 ntBASIC20.09■□□□□ 0.81
CHRDQ9H2X0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 AC244015.2-201ENST00000616358 1861 ntBASIC20.09■□□□□ 0.81
CHRDQ9H2X0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.09■□□□□ 0.81
CHRDQ9H2X0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 AK4P3-201ENST00000418260 669 ntBASIC20.08■□□□□ 0.81
CHRDQ9H2X0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CHRDQ9H2X0 AC091076.1-201ENST00000610741 619 ntBASIC20.08■□□□□ 0.81
CHRDQ9H2X0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.08■□□□□ 0.8
CHRDQ9H2X0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.08■□□□□ 0.8
CHRDQ9H2X0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHRDQ9H2X0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms