Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS16Q9H269 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.92■■□□□ 1.1
VPS16Q9H269 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.92■■□□□ 1.1
VPS16Q9H269 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS16Q9H269 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS16Q9H269 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VPS16Q9H269 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VPS16Q9H269 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS16Q9H269 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.92■■□□□ 1.1
VPS16Q9H269 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS16Q9H269 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS16Q9H269 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.92■■□□□ 1.1
VPS16Q9H269 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS16Q9H269 AC087623.3-201ENST00000607047 1098 ntBASIC21.92■■□□□ 1.1
VPS16Q9H269 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
VPS16Q9H269 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS16Q9H269 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VPS16Q9H269 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VPS16Q9H269 TREX1-205ENST00000625293 1783 ntBASIC21.92■■□□□ 1.1
VPS16Q9H269 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.92■■□□□ 1.1
VPS16Q9H269 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS16Q9H269 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS16Q9H269 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
VPS16Q9H269 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS16Q9H269 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS16Q9H269 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.91■■□□□ 1.1
VPS16Q9H269 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.91■■□□□ 1.1
VPS16Q9H269 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.91■■□□□ 1.1
VPS16Q9H269 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
VPS16Q9H269 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.91■■□□□ 1.1
VPS16Q9H269 AC013268.1-206ENST00000638368 961 ntBASIC21.91■■□□□ 1.1
VPS16Q9H269 AC112229.1-201ENST00000639295 961 ntBASIC21.91■■□□□ 1.1
VPS16Q9H269 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS16Q9H269 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS16Q9H269 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
VPS16Q9H269 PTBP1P-201ENST00000554374 1601 ntBASIC21.91■■□□□ 1.1
VPS16Q9H269 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS16Q9H269 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS16Q9H269 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
VPS16Q9H269 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.9■■□□□ 1.1
VPS16Q9H269 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS16Q9H269 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS16Q9H269 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS16Q9H269 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS16Q9H269 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS16Q9H269 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS16Q9H269 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.9■■□□□ 1.1
VPS16Q9H269 AC007322.4-201ENST00000509611 723 ntBASIC21.9■■□□□ 1.1
VPS16Q9H269 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.9■■□□□ 1.1
VPS16Q9H269 AC137761.2-201ENST00000561729 223 ntBASIC21.9■■□□□ 1.1
VPS16Q9H269 AC145350.3-201ENST00000569033 163 ntBASIC21.9■■□□□ 1.1
VPS16Q9H269 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.9■■□□□ 1.1
VPS16Q9H269 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.9■■□□□ 1.1
VPS16Q9H269 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS16Q9H269 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
VPS16Q9H269 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
VPS16Q9H269 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS16Q9H269 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS16Q9H269 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS16Q9H269 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VPS16Q9H269 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS16Q9H269 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
VPS16Q9H269 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS16Q9H269 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS16Q9H269 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS16Q9H269 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.89■■□□□ 1.09
VPS16Q9H269 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS16Q9H269 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS16Q9H269 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.89■■□□□ 1.09
VPS16Q9H269 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.89■■□□□ 1.09
VPS16Q9H269 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.89■■□□□ 1.09
VPS16Q9H269 AL162412.1-201ENST00000567129 965 ntBASIC21.89■■□□□ 1.09
VPS16Q9H269 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
VPS16Q9H269 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
VPS16Q9H269 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS16Q9H269 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.89■■□□□ 1.09
VPS16Q9H269 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS16Q9H269 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
VPS16Q9H269 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.88■■□□□ 1.09
VPS16Q9H269 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
VPS16Q9H269 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
VPS16Q9H269 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS16Q9H269 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VPS16Q9H269 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VPS16Q9H269 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS16Q9H269 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
VPS16Q9H269 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS16Q9H269 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.88■■□□□ 1.09
VPS16Q9H269 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
VPS16Q9H269 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
VPS16Q9H269 MFSD11-216ENST00000590393 1141 ntBASIC21.88■■□□□ 1.09
VPS16Q9H269 MIR6821-201ENST00000617625 74 ntBASIC21.88■■□□□ 1.09
VPS16Q9H269 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.88■■□□□ 1.09
VPS16Q9H269 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.88■■□□□ 1.09
VPS16Q9H269 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS16Q9H269 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.88■■□□□ 1.09
VPS16Q9H269 AC093484.2-201ENST00000580996 2166 ntBASIC21.88■■□□□ 1.09
VPS16Q9H269 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
VPS16Q9H269 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VPS16Q9H269 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms