Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.76■■□□□ 1.39
NBPF3Q9H094 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.76■■□□□ 1.39
NBPF3Q9H094 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NBPF3Q9H094 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF3Q9H094 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF3Q9H094 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF3Q9H094 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF3Q9H094 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF3Q9H094 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF3Q9H094 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
NBPF3Q9H094 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF3Q9H094 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF3Q9H094 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NBPF3Q9H094 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF3Q9H094 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.74■■□□□ 1.39
NBPF3Q9H094 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF3Q9H094 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
NBPF3Q9H094 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF3Q9H094 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.74■■□□□ 1.39
NBPF3Q9H094 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.74■■□□□ 1.39
NBPF3Q9H094 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.74■■□□□ 1.39
NBPF3Q9H094 AC211429.1-201ENST00000415277 523 ntBASIC23.74■■□□□ 1.39
NBPF3Q9H094 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.74■■□□□ 1.39
NBPF3Q9H094 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.74■■□□□ 1.39
NBPF3Q9H094 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF3Q9H094 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF3Q9H094 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF3Q9H094 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF3Q9H094 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF3Q9H094 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NBPF3Q9H094 BX119927.1-201ENST00000636596 1552 ntBASIC23.74■■□□□ 1.39
NBPF3Q9H094 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.73■■□□□ 1.39
NBPF3Q9H094 AC124283.5-201ENST00000624661 1809 ntBASIC23.73■■□□□ 1.39
NBPF3Q9H094 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.73■■□□□ 1.39
NBPF3Q9H094 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.73■■□□□ 1.39
NBPF3Q9H094 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.73■■□□□ 1.39
NBPF3Q9H094 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.73■■□□□ 1.39
NBPF3Q9H094 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 AC233263.1-201ENST00000578059 224 ntBASIC23.73■■□□□ 1.39
NBPF3Q9H094 REXO1L12P-201ENST00000622156 912 ntBASIC23.73■■□□□ 1.39
NBPF3Q9H094 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
NBPF3Q9H094 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.73■■□□□ 1.39
NBPF3Q9H094 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
NBPF3Q9H094 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.73■■□□□ 1.39
NBPF3Q9H094 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
NBPF3Q9H094 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NBPF3Q9H094 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NBPF3Q9H094 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NBPF3Q9H094 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NBPF3Q9H094 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 FAM197Y4-202ENST00000622692 608 ntBASIC23.72■■□□□ 1.39
NBPF3Q9H094 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 KRT8P20-201ENST00000423953 1409 ntBASIC23.72■■□□□ 1.39
NBPF3Q9H094 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
NBPF3Q9H094 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NBPF3Q9H094 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.72■■□□□ 1.39
NBPF3Q9H094 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NBPF3Q9H094 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
NBPF3Q9H094 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NBPF3Q9H094 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NBPF3Q9H094 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
NBPF3Q9H094 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NBPF3Q9H094 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.71■■□□□ 1.39
NBPF3Q9H094 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
NBPF3Q9H094 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.71■■□□□ 1.39
NBPF3Q9H094 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms