Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 TSPY13P-201ENST00000338964 914 ntBASIC16.17■□□□□ 0.18
NKX6-2Q9C056 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 BX664725.1-201ENST00000438252 379 ntBASIC16.17■□□□□ 0.18
NKX6-2Q9C056 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 AC009113.1-201ENST00000570267 2443 ntBASIC16.16■□□□□ 0.18
NKX6-2Q9C056 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.16■□□□□ 0.18
NKX6-2Q9C056 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NKX6-2Q9C056 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 AC068880.1-201ENST00000507289 2297 ntBASIC16.15■□□□□ 0.18
NKX6-2Q9C056 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 AC103724.3-201ENST00000564481 992 ntBASIC16.15■□□□□ 0.18
NKX6-2Q9C056 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NKX6-2Q9C056 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
NKX6-2Q9C056 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NKX6-2Q9C056 AC133637.1-201ENST00000624115 1537 ntBASIC16.14■□□□□ 0.18
NKX6-2Q9C056 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.14■□□□□ 0.17
NKX6-2Q9C056 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NKX6-2Q9C056 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms