Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SSBP3Q9BWW4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 RPS2P52-201ENST00000469610 820 ntBASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 C1QBPP2-201ENST00000528754 825 ntBASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 FAM197Y4-202ENST00000622692 608 ntBASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 AC066615.1-201ENST00000640911 628 ntBASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSBP3Q9BWW4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 AC092720.2-201ENST00000602388 1665 ntBASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 AC233263.1-201ENST00000578059 224 ntBASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 RN7SL471P-201ENST00000580476 299 ntBASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 AP006294.2-201ENST00000641667 209 ntBASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSBP3Q9BWW4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 KRT8P20-201ENST00000423953 1409 ntBASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.62■□□□□ 0.25
SSBP3Q9BWW4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms